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AT1G78050.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plastid 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : phosphoglycerate/bisphosphoglycerate mutase
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
phosphoglycerate/bisphosphoglycerate mutase (PGM); FUNCTIONS IN: intramolecular transferase activity, phosphotransferases, catalytic activity; INVOLVED IN: response to nitrate, metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Histidine phosphatase superfamily, clade-1 (InterPro:IPR013078), Phosphoglycerate/bisphosphoglycerate mutase, active site (InterPro:IPR001345), Phosphoglycerate mutase 1 (InterPro:IPR005952); BEST Arabidopsis thaliana protein match is: Phosphoglycerate mutase family protein (TAIR:AT1G22170.1); Has 11796 Blast hits to 11695 proteins in 2243 species: Archae - 59; Bacteria - 8243; Metazoa - 598; Fungi - 291; Plants - 140; Viruses - 0; Other Eukaryotes - 2465 (source: NCBI BLink).
Protein Annotations
eggNOG:COG0588eggNOG:KOG0235EMBL:CP002684EnsemblPlants:AT1G78050
EnsemblPlants:AT1G78050.1entrez:844140Gene3D:3.40.50.1240GeneID:844140
GO:GO:0005829GO:GO:0006094GO:GO:0006096GO:GO:0009536
GO:GO:0010167GO:GO:0043456GO:GO:0046538Gramene:AT1G78050.1
HAMAP:MF_01039hmmpanther:PTHR11931hmmpanther:PTHR11931:SF6InParanoid:F4I8M8
InterPro:IPR001345InterPro:IPR005952InterPro:IPR013078InterPro:IPR029033
KEGG:00010+5.4.2.11KEGG:00260+5.4.2.11KEGG:00680+5.4.2.11KEGG:ath:AT1G78050
KO:K01834OMA:NLHAVGPPANTHER:PTHR11931PaxDb:F4I8M8
Pfam:PF00300PRIDE:F4I8M8PROSITE:PS00175ProteinModelPortal:F4I8M8
Proteomes:UP000006548Reactome:R-ATH-70171Reactome:R-ATH-70263RefSeq:NP_177928.2
scanprosite:PS00175SMART:SM00855SMR:F4I8M8STRING:3702.AT1G78050.1
SUPFAM:SSF53254TAIR:AT1G78050tair10-symbols:PGMUniGene:At.48387
UniGene:At.71165unipathway:UPA00109UniProt:F4I8M8
Coordinates (TAIR10) chr1:+:29348095..29349592
Molecular Weight (calculated) 37217.90 Da
IEP (calculated) 10.02
GRAVY (calculated) -0.41
Length 332 amino acids
Sequence (TAIR10)
(BLAST)
001: MATSTTMSHQ AIGSVVSQRP FKASQFLKEP LNNVPMKFRQ KRFKIEATAS QISVVDNTFL SPSPSKNKPH ESKKKSNEAA LILIRHGESL WNEKNLFTGC
101: VDVPLTQKGV GEAIEAGKKI SNIPVDLIFT SSLIRAQMTA MLAMTQHRRK KVPIILHNES VKAKTWSHVF SEETRKQSIP VIAAWQLNER MYGELQGLNK
201: KETAERYGTQ QVHEWRRSYE IPPPKGESLE MCAERAVAYF EDNIKPELAS GNNVMIAAHG NSLRSIIMYL DDLTSQEVTT LDLSTGVPLL YIFKEGKFMK
301: RGSPVGSTEA GVYAYTKRLA QYREKLDAAA TI
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)