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AT5G54390.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
cytosol 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : HAL2-like
Curator
Summary (TAIR10)
Encodes a 3'-phosphoadenosine-5'-phosphate (PAP) phosphatase that is sensitive to physiological concentrations of Na+. It does not also act as inositol polyphosphate 1-phosphatases, which other members of the HAL2-like family do. It is proposed that AHL acts in concert with sulphotransferases to prevent both the toxicity of PAP on RNA processing enzymes as well as the product inhibition of PAP on sulphate conjugation.
Computational
Description (TAIR10)
HAL2-like (HL); FUNCTIONS IN: 3'(2'),5'-bisphosphate nucleotidase activity, inositol or phosphatidylinositol phosphatase activity; INVOLVED IN: sulfur metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Inositol monophosphatase, conserved site (InterPro:IPR020550), Inositol monophosphatase (InterPro:IPR000760), 3(2),5 -bisphosphate nucleotidase HAL2 (InterPro:IPR006239), Inositol monophosphatase, metal-binding site (InterPro:IPR020583); BEST Arabidopsis thaliana protein match is: Inositol monophosphatase family protein (TAIR:AT5G63980.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT5G54390-MONOMERBioGrid:20771BRENDA:3.1.3.7EC:3.1.3.7
eggNOG:COG1218eggNOG:KOG1528EMBL:AB026634EMBL:AF016644
EMBL:AY045848EMBL:AY086488EMBL:AY091377EMBL:CP002688
EMBL:U55205EnsemblPlants:AT5G54390EnsemblPlants:AT5G54390.1entrez:835527
GeneID:835527Genevisible:Q38945GO:GO:0000287GO:GO:0005737
GO:GO:0006790GO:GO:0008441GO:GO:0016311GO:GO:0046854
Gramene:AT5G54390.1hmmpanther:PTHR20854hmmpanther:PTHR20854:SF32HOGENOM:HOG000170673
InParanoid:Q38945IntAct:Q38945InterPro:IPR000760InterPro:IPR006239
InterPro:IPR020550InterPro:IPR020583KEGG:ath:AT5G54390KO:K01082
MINT:MINT-8066926OMA:AGHIIVEPANTHER:PTHR20854PaxDb:Q38945
PDB:1FLFPDB:1Q00PDBsum:1FLFPDBsum:1Q00
Pfam:PF00459Pfam:Q38945PhylomeDB:Q38945PRIDE:Q38945
PRO:PR:Q38945PROSITE:PS00629PROSITE:PS00630ProteinModelPortal:Q38945
Proteomes:UP000006548RefSeq:NP_200250.1scanprosite:PS00629scanprosite:PS00630
SMR:Q38945STRING:3702.AT5G54390.1SUPFAM:SSF56655TAIR:AT5G54390
tair10-symbols:AHLtair10-symbols:ATAHLtair10-symbols:HLTIGRfam:TIGR01330
TIGRFAMs:TIGR01330UniGene:At.9004UniProt:Q38945
Coordinates (TAIR10) chr5:+:22086133..22087586
Molecular Weight (calculated) 39376.20 Da
IEP (calculated) 5.44
GRAVY (calculated) 0.08
Length 373 amino acids
Sequence (TAIR10)
(BLAST)
001: MAVDSLETEI DTAVRVVHLA SSLCVKVQEK LHLPNGGHVK SKDDDSPVTV ADFGVQAIVS WVLAEVFGDQ NLSIVAEEDT ETLSEADSLG LLGAVSNAVN
101: EALSEAQNYG LPKPVKPLGS SEILKAISRC NSVGGPKGRH WVLDPVDGTL GFVRGDQYAV ALALIENGKV LLGVLGCPNY PVKKECLSNG CNQAMKTKAV
201: AGSVSKGCVM YAKRGSGQAW MQPLIVGGIP ESATLLKVSS VDDPVLATVC EPVERANSNH LFTAGLANSM GVRKQPMRVY SMVKYAAIAR GDAEVFMKFA
301: QSSYKEKIWD HAAGVVIVEE AGGVVTDAGG RNLDFSKGVY LEGLDRGIIA CSGQVLHEKI IGAVYASWES SSL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)