AT5G53010.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:endoplasmic reticulum 0.697 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : calcium-transporting ATPase, putative | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
calcium-transporting ATPase, putative; FUNCTIONS IN: calcium-transporting ATPase activity, calmodulin binding; INVOLVED IN: cation transport, calcium ion transport, metabolic process, ATP biosynthetic process; LOCATED IN: membrane; EXPRESSED IN: egg cell; CONTAINS InterPro DOMAIN/s: ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type, calcium-transporting, PMCA-type (InterPro:IPR006408), ATPase, P-type, H+ transporting proton pump (InterPro:IPR000695), Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type cation-transporter, N-terminal (InterPro:IPR004014), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type cation-transporter, C-terminal (InterPro:IPR006068); BEST Arabidopsis thaliana protein match is: autoinhibited Ca2+ -ATPase, isoform 8 (TAIR:AT5G57110.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:-:21488899..21496537 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 115808.00 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 7.94 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.10 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 1049 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
0001: MVVFNLSMFR FWKRPSPNVG PGDLEIGLGG GYSSSLADDD VVIPHPPVAE DVPSELEAGI DPEAALENIA PHDLEAGHVT THRWRRVRTL KRASVAFYQV 0101: VICQMLRRNR TGTVPDQALV HDDHQETEQS SNEASTSGGF GIGVEELVQL VKERSLEALN RYNGVHGLSN LLKTDLKVGI DRRDDEILLR RNAYGSNTYP 0201: CKKGKTFWYF LWRASQFSHL LVIMFAAVFF SLLRIKTKGI LDGWYIEACI VLVTVFHIIA IAVAEYKQSC RFIKLTEEKR TVYLEVIRGG RRVRVSIYDI 0301: VVGDIVPLKN GCQVPADGVL FVANSLKVAE QEVTASDEIV QKDLQTNPFL LSGSKLIEGI GTMLVTSVGM NTEWGLKMEV SQKTDEEKPF QGYLKWLAIS 0401: ASWFVVLFAS VACSIQVGGS SAPSWQGPNN RFISRYFSGV TKKSDGTPMF IYGITTADEA IEFVITSLSF GIATIVVAVP VGLSIAVRLN FAKTTKKMRK 0501: DKVLMSVVDV WAGGIRMQDM DDVSQLPTFL KELIIEGIAQ NTNGSVVFET GVTEPEVYGS PTEQAILNFG NKLGMKFDDA RSASLVRHTI PFNPKKKYGG 0601: VALQLGTHAH VHWKGSAKTI LSSCEGYMDG ANNSRAINEQ KRKSFEGTIE NMSKEGLRCA ALAYQPCELG SLPTITEPRN LVLLAIVGIK DPCRPGTRDA 0701: IQLCNSGSVK VCMVTDNDGL TAQAIAIECG ILTDASGRNI RTGAQFRELS DLEREQIAGD ILVFAQSSPN DNLLLVQALK KRGHIVAATG MGIHDPKTLR 0801: EADVSLAMGV GGTAAAKENS DFIILDDNFA TIVKCIIWSR SLYNNVQKSI LFRLTVSVSA LAVCVVEVVV YDAFPLNAVQ FLLVNLIIDI LGALALAYRP 0901: RSDHHLMGKP PVGIRDPLIT KTMWSKMIIQ VFYLVLSLVL INSEKLLKLK HGQTGNAEKM MNTLIFNSFV FYLVFNEFEI QSVDQTFKEV LRENMFLVTI 1001: TSTIISQIIV IKFAGIFIDL KKWVTTSLLG LLSQVATRYP YPAIQYHRN |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)