suba logo
AT5G51210.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

.
SUBAcon:
vacuole 1.000
ASURE: vacuole
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : oleosin3
Curator
Summary (TAIR10)
Encodes oleosin3, a protein found in oil bodies, involved in seed lipid accumulation.
Computational
Description (TAIR10)
oleosin3 (OLEO3); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: lipid storage; LOCATED IN: monolayer-surrounded lipid storage body, integral to membrane, membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Oleosin (InterPro:IPR000136); BEST Arabidopsis thaliana protein match is: oleosin 1 (TAIR:AT4G25140.1); Has 527 Blast hits to 527 proteins in 51 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 527; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
BioGrid:20441eggNOG:ENOG410JXPSeggNOG:ENOG41103SUEMBL:BT020472
EMBL:BT021141EnsemblPlants:AT5G51210EnsemblPlants:AT5G51210.1entrez:835196
ExpressionAtlas:Q5HZ52GeneID:835196GO:GO:0012511GO:GO:0016021
Gramene:AT5G51210.1hmmpanther:PTHR33203hmmpanther:PTHR33203:SF7InterPro:IPR000136
KEGG:ath:AT5G51210OMA:IAHAANDPfam:PF01277Pfam:Q43284
PhylomeDB:Q5HZ52PROSITE:PS00811RefSeq:NP_199934.1scanprosite:PS00811
STRING:3702.AT5G51210.1TAIR:AT5G51210tair10-symbols:OLEO3TMHMM:TMhelix
UniGene:At.9693UniProt:Q43284UniProt:Q5HZ52
Coordinates (TAIR10) chr5:+:20820171..20820706
Molecular Weight (calculated) 14853.10 Da
IEP (calculated) 10.46
GRAVY (calculated) 0.29
Length 141 amino acids
Sequence (TAIR10)
(BLAST)
001: MADQTRTHHE MISRDSTQEA HPKARQMVKA ATAVTAGGSL LVLSGLTLAG TVIALTVATP LLVIFSPVLV PAVVTVALII TGFLASGGFG IAAITAFSWL
101: YRHMTGSGSD KIENARMKVG SRVQDTKYGQ HNIGVQHQQV S
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)