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AT2G34870.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
extracellular 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : hydroxyproline-rich glycoprotein family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
maternal effect embryo arrest 26 (MEE26); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: Glycine-rich protein family (TAIR:AT3G02670.1); Has 2350 Blast hits to 1470 proteins in 203 species: Archae - 4; Bacteria - 144; Metazoa - 943; Fungi - 121; Plants - 511; Viruses - 279; Other Eukaryotes - 348 (source: NCBI BLink).
Protein Annotations
EMBL:AC004238EMBL:AY086924EMBL:CP002685EnsemblPlants:AT2G34870
EnsemblPlants:AT2G34870.1entrez:818052GeneID:818052GO:GO:0009793
Gramene:AT2G34870.1HOGENOM:HOG000115001KEGG:ath:AT2G34870OMA:FPPPFGV
PIR:T00469Proteomes:UP000006548RefSeq:NP_565794.1STRING:3702.AT2G34870.1
TAIR:AT2G34870tair10-symbols:MEE26UniGene:At.37748UniProt:O64751
Coordinates (TAIR10) chr2:+:14710819..14711169
Molecular Weight (calculated) 12383.20 Da
IEP (calculated) 4.73
GRAVY (calculated) 0.25
Length 116 amino acids
Sequence (TAIR10)
(BLAST)
001: MASSSLISVA LTLILIFHLM PETTVARRLT DQKPSDEVVT TTTDEANNLP FPPGLPFGGV PPLPSLFPPF VPSPFPGNIP RLPFPFPFPT SPPAPSLPGF
101: PGFTFPPLPF LTPPPL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)