AT5G48440.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plastid 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : FAD-dependent oxidoreductase family protein | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
FAD-dependent oxidoreductase family protein; FUNCTIONS IN: oxidoreductase activity; LOCATED IN: chloroplast; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: FAD dependent oxidoreductase (InterPro:IPR006076); Has 8923 Blast hits to 8893 proteins in 1586 species: Archae - 100; Bacteria - 6746; Metazoa - 279; Fungi - 106; Plants - 79; Viruses - 0; Other Eukaryotes - 1613 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:-:19629932..19632588 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 49806.70 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.79 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.09 | ||||||||||||||||||||||||||||||||
| Length | 459 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MVSIFLQSPT FLTPLSYPFS SRSSTKRTQH GASLSLRVTA SRSSFDVVVV GGGIIGLTIA RQFLTGSDLS VAVVDKAVPC SGATGAGQGY IWMTHKKPGS 101: DVWDLTLRSH ELWHKLAESL TDDGLDPEEL LGWKKTGSLL IGRTTEECVA LKQKVHELSE AGLRTEYLSS AELLLKEPAI LVNDNTGAAF LPDDSQLDAH 201: RAVAYIEKGN RAFATAGRYA EFYNEPVTGL IRSDGDSKVV AGVKTLKRNL YGKKATIVAA GCWSGSLMHE LLKDCNIPLD VPVKPRKGHL LVVENFDSFH 301: LNHGIMEAGY SNHQSASVSG LDVDERMLSI SMTATMDTSG NLVLGSSREF VGFDTEADEF IIRCIWERAA EFFPKLRDIS LEDFIRNRKV RVGLRPYMPD 401: GKPVIGSVPG LQNMYLAAGH EGGGLSMALA TAEMVTDMVL GKPSQVDTST FGVKGRRCC |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)