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AT1G48430.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
cytosol 0.895
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:24134884 (2013): cytoskeleton microtubules
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Dihydroxyacetone kinase
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Dihydroxyacetone kinase; FUNCTIONS IN: glycerone kinase activity, ATP binding; INVOLVED IN: glycerol metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Dak phosphatase (InterPro:IPR004007), Dihydroxyacetone kinase (InterPro:IPR012734), Dak kinase (InterPro:IPR004006); BEST Arabidopsis thaliana protein match is: Dihydroxyacetone kinase (TAIR:AT3G17770.1); Has 5033 Blast hits to 5026 proteins in 1105 species: Archae - 14; Bacteria - 4080; Metazoa - 97; Fungi - 207; Plants - 69; Viruses - 0; Other Eukaryotes - 566 (source: NCBI BLink).
Protein Annotations
eggNOG:COG2376eggNOG:KOG2426EMBL:CP002684EnsemblPlants:AT1G48430
EnsemblPlants:AT1G48430.1entrez:841264GeneID:841264GO:GO:0004371
GO:GO:0005524GO:GO:0006071Gramene:AT1G48430.1hmmpanther:PTHR28629
hmmpanther:PTHR28629:SF4InParanoid:F4HYF4InterPro:IPR004006InterPro:IPR004007
InterPro:IPR012734KEGG:00051+2.7.1.28KEGG:00561+2.7.1.29KEGG:00680+2.7.1.29
KEGG:ath:AT1G48430KO:K00863OMA:ANYDKVAPaxDb:F4HYF4
Pfam:PF02733Pfam:PF02734Pfscan:PS51480Pfscan:PS51481
PRIDE:F4HYF4PROSITE:PS51480PROSITE:PS51481ProteinModelPortal:F4HYF4
Proteomes:UP000006548Reactome:R-ATH-70350RefSeq:NP_175276.3SMART:SM01120
SMR:F4HYF4STRING:3702.AT1G48430.1SUPFAM:SSF101473SUPFAM:SSF82549
TAIR:AT1G48430TIGRfam:TIGR02361TIGRFAMs:TIGR02361UniGene:At.28765
UniProt:F4HYF4
Coordinates (TAIR10) chr1:-:17902874..17906689
Molecular Weight (calculated) 61928.30 Da
IEP (calculated) 4.94
GRAVY (calculated) 0.08
Length 593 amino acids
Sequence (TAIR10)
(BLAST)
001: MVPPAKKFIN NPNDVVTEFI EGLVETYPGL QYLDGLPEIK VVLRADVSAA NYDKVAVISG GGSGHEPAQA GYVGEGMLTA AICGDVFASP TVDSILARIR
101: AVTGPKGCLL VVTNYTGDRL NFGLAAEQAK TEGFDIETVI VGDDCALPPP RGVAGRRGLA GTVLVHKVAG AAAAAGLSLA EVAAEAKHAS EMVGTMGVAL
201: SVCALPGQVT SDRLGPEKME LGLGVHGEPG AAVVDIQPVE VVVSHVLQQI LSPETNYVPI TRGNSVVLMI NGLGGTPLME LMIAAGKAVP KLQLEYGLAV
301: DRVYTGSFMT SLDMAGFSIS IMKADQSILE RLDAPTNAPS WPVGTDGSRP PAKIPVPLPF RSTKNEESRY RPQELSQQGR ILEAAIEAAA TVVINLKDSL
401: NEWDGKVGDG DCGSTMCRGA TAILEDMKKY YPLNDAAETV SEIGSSIRRV MGGTSGIIYN LLCKAAYAEL KANSQSETTS KHWSEALKSS ISAVSKYGGA
501: TAGYRTMLDA LIPASKVLEE KLSVGEDPIA AFVLSAEAAT AGAESTIHMK AQAGRSSYVS AEIFASIPDP GAMAAAAWYS AAARAVKEQR QRF
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)