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AT1G03210.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
vacuole 0.462
plasma membrane 0.387
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Phenazine biosynthesis PhzC/PhzF protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Phenazine biosynthesis PhzC/PhzF protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Phenazine biosynthesis PhzC/PhzF protein (InterPro:IPR003719); BEST Arabidopsis thaliana protein match is: Phenazine biosynthesis PhzC/PhzF protein (TAIR:AT4G02860.1); Has 4142 Blast hits to 4139 proteins in 1263 species: Archae - 52; Bacteria - 3137; Metazoa - 121; Fungi - 124; Plants - 90; Viruses - 0; Other Eukaryotes - 618 (source: NCBI BLink).
Protein Annotations
eggNOG:COG0384eggNOG:KOG3033EMBL:AC005278EMBL:AF332412
EMBL:CP002684EnsemblPlants:AT1G03210EnsemblPlants:AT1G03210.1entrez:838493
GeneID:838493GO:GO:0003824GO:GO:0009058Gramene:AT1G03210.1
hmmpanther:PTHR13774hmmpanther:PTHR13774:SF17InterPro:IPR003719KEGG:00520+5.1.-.-
KEGG:00960+5.1.-.-KEGG:ath:AT1G03210OMA:FNTRSGEPfam:PF02567
PhylomeDB:Q9ZVS2PIR:D86163PIRSF:PIRSF016184PRO:PR:Q9ZVS2
Proteomes:UP000006548RefSeq:NP_171820.1SMR:Q9ZVS2STRING:3702.AT1G03210.1
SUPFAM:SSF54506TAIR:AT1G03210TIGRfam:TIGR00654TIGRFAMs:TIGR00654
UniGene:At.22184UniProt:Q9ZVS2
Coordinates (TAIR10) chr1:+:782948..784240
Molecular Weight (calculated) 31711.70 Da
IEP (calculated) 4.64
GRAVY (calculated) -0.03
Length 286 amino acids
Sequence (TAIR10)
(BLAST)
001: MAEKKRVKYF IVDAFAESAF KGNPAAVCFL EDDNERDDAW LQSLATEFNI SETCFLTPII GDLPRFRLRW FTPVAEVDLC GHATLASAHV LFSTGLVGSE
101: TVEFDTLSGI LTAKHLKNDD DGEESSIELD FPVVPTYEVN YIDDDLSLFS KALNGATILD VKATKKDLLV VLSSWEAVID LKPRLDEISK CPCEGMMVTA
201: AASDGSTYDF CSRYFAPRFG INEDPVTGSA HCALAHYWSL RMNKCDFFAY QASSRGGTLK VHLDKEKQRV LLRGKAVTVM EGYVLV
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)