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AT5G46510.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
cytosol 0.830
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Disease resistance protein (TIR-NBS-LRR class) family
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Disease resistance protein (TIR-NBS-LRR class) family; FUNCTIONS IN: transmembrane receptor activity, nucleoside-triphosphatase activity, nucleotide binding, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), NB-ARC (InterPro:IPR002182), Toll-Interleukin receptor (InterPro:IPR000157), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) family (TAIR:AT5G46520.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
eggNOG:COG4886eggNOG:ENOG410J6H3EMBL:AB019223EMBL:CP002688
EnsemblPlants:AT5G46510EnsemblPlants:AT5G46510.1entrez:834694Gene3D:3.40.50.10140
Gene3D:3.40.50.300Gene3D:3.80.10.10GeneID:834694GO:GO:0005524
GO:GO:0007165GO:GO:0043531Gramene:AT5G46510.1hmmpanther:PTHR11017
hmmpanther:PTHR11017:SF20HOGENOM:HOG000064702InterPro:IPR000157InterPro:IPR002182
InterPro:IPR003593InterPro:IPR011713InterPro:IPR011991InterPro:IPR027417
InterPro:IPR032675KEGG:ath:AT5G46510Pfam:PF00931Pfam:PF01582
Pfam:PF07725Pfscan:PS50104PhylomeDB:Q9FHF4PROSITE:PS50104
Proteomes:UP000006548RefSeq:NP_199463.1SMART:SM00255SMART:SM00382
SMR:Q9FHF4STRING:3702.AT5G46510.1SUPFAM:SSF46785SUPFAM:SSF52058
SUPFAM:SSF52200SUPFAM:SSF52540TAIR:AT5G46510UniGene:At.29951
UniProt:Q9FHF4
Coordinates (TAIR10) chr5:+:18860451..18865210
Molecular Weight (calculated) 153553.00 Da
IEP (calculated) 4.86
GRAVY (calculated) -0.30
Length 1353 amino acids
Sequence (TAIR10)
(BLAST)
0001: MASSRNWVYD VFPSFSGTDV RRNFLSHLLK GLHKSVNSFR DQNMERSQSL DPMLKQAIRD SRIALVVFSK NYASSSWCLN ELLEIVKCKE EFGQMVIPIF
0101: YCLDPSHVRH QDGDFGKNFE ETCGRNTEEE KIQWEKALTD VANLAGFDSV TWDDEAKMIE EIANDVSGKL LSTSSTDSAE NSIGIEDHIA NMSVLLQLEA
0201: EEVRMVGIWG SSGIGKTTIA RALFNQLSRH FPVSKFIDRA FVYKSRETYK GANPDDPNMK LHLQGCFLSE ILGKKDIKID HLGALGERLK HQKTLIIIDD
0301: LDDLVVLDSL VGKTNWFGCG SRIIVITNNK QFLRAHGIDH IYEVSLPSKE RAQEMFCQSA FGENSPPEGF EELVVEIAWL AGSLPLGLTV FGSALRGRKK
0401: EYWVKMLPRL QNDLDGNIEE TLKVSYDAIG NVKDQALFRL IACLFNHVKV RDIELLLADS GLDVNIALEN LVDKSLIHVR NDHVEMHRLL QETGRNIVRS
0501: QSTDNPGERE FLVDSNDSRT VLSEGIGTRK VLGISLDTSK VSEFCVHENA FKGMGNLLFL DISSKTFIEE EVKVHLPEKI NYYSVQPKQL IWDRFPLKCM
0601: PYTFLRNLVK LEMHDSKLEK LWEGAMSFTC LKELDMWASK YLKEIPDLSK ATNIEKLDFG HCWSLVELPS SIRNLNKLLE LNMEYCGELE TLPTGFNLKS
0701: LDYLNFNECW KLRTFPEFAT NISNLILAET SIEEYPSNLY FKNVRELSMG KADSDENKCQ GVKPFMPMLS PTLTLLELWN IPNLVELSSS FQNLNNLERL
0801: DICYCRNLES LPTGINLESL VSLNLFGCSR LKRFPDISTN IKYLDLDQTG IEEVPWQIEN FFNLTKLTMK GCRELKCVSL NIFKLKHLGE VSFSNCGALT
0901: RVDLSCYPSG VEMMKADNAD IVSEETTSSL PDSCVLNVNF MDCVNLDREP VLHQQSIIFN SMILPGEEVP SYFTYRTSDS QPFGTSSSLP IPLLPTQLSQ
1001: PFFRFRVCAV VSASNGVYIG VYSRFKGRIG NKFDSFGELH KFMEIEKGIH LCIFDCRIRL YKDNVPLSQL NYDHVDINIH ITSGDWRSTV VLKEWGIRLL
1101: EDCSSAENRL GNPNSTLPHV CVEDEENLVN GTEQGDRGDV VTETSSKQNE DVILLQRSAD SMFSRMSGKE MISYFTHRTT GTSLTNIPLP HTSPSQPFFR
1201: FKAFAVVGCK SSGQFSYFVT HISCRFKDGF ENQPRRLYKA ENGNHLDIYE CSFPLYQGNA SPAEMNYDRV DIQLHLRYRS DSTVRLIVWG IRLIEDCSSS
1301: ENQLDSETDQ FEECGNSDIG HEIDQSEECE DMDDTGGICI GIDQSEERGD SDE
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)