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AT5G45370.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
vacuole 0.817
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : nodulin MtN21 /EamA-like transporter family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
nodulin MtN21 /EamA-like transporter family protein; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620); BEST Arabidopsis thaliana protein match is: nodulin MtN21 /EamA-like transporter family protein (TAIR:AT4G19185.1); Has 7157 Blast hits to 7143 proteins in 1340 species: Archae - 107; Bacteria - 4855; Metazoa - 27; Fungi - 14; Plants - 1223; Viruses - 0; Other Eukaryotes - 931 (source: NCBI BLink).
Protein Annotations
EnsemblPlants:AT5G45370EnsemblPlants:AT5G45370.1entrez:834573hmmpanther:PTHR31218
hmmpanther:PTHR31218:SF57Pfam:PF00892SUPFAM:0043518TMHMM:TMhelix
Coordinates (TAIR10) chr5:+:18388411..18390282
Molecular Weight (calculated) 38451.50 Da
IEP (calculated) 8.55
GRAVY (calculated) 0.70
Length 357 amino acids
Sequence (TAIR10)
(BLAST)
001: MAAPAILNGG DATERETRMA HSAMTLVQVI NGGYHVVTKV ALNVGVNQLV FCVFRDLLAL SILAPLAFFR ERTIRPPMNR SIFFSLFFLG LAGIFGNQLL
101: FLMGLSYTNP TYAAAIQPSI PVFTFLLAVL MGTEKVNLLK VEGQTKVGGT LVCVSGAIAM ALFRGPALFG VSSFLGLGFD QWHIGVLCLI GNCMCMAAFL
201: AVQAPVLKKY PAYLSVAAYS YFFGASIMIT TAILFVREPK DWSLTQSEVL AVIFAGVFAS ALNYGLLTWS NKILGAALVS LYNPLQPATS AFLSTIFLGS
301: PIYLGSVLGG ILIICGLYMV TWASYREQQT TSAGNEIASS SDVRISEPFI YRDETGK
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)