AT5G45280.1
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:extracellular 1.000 ASURE: extracellular What is SUBAcon? |
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Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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Description (TAIR10) | protein_coding : Pectinacetylesterase family protein | ||||||||||||||||||||||||||||||||||||||||||||||||
Curator Summary (TAIR10) |
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Computational Description (TAIR10) |
Pectinacetylesterase family protein; FUNCTIONS IN: carboxylesterase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectinacetylesterase (InterPro:IPR004963); BEST Arabidopsis thaliana protein match is: Pectinacetylesterase family protein (TAIR:AT4G19410.2); Has 552 Blast hits to 548 proteins in 96 species: Archae - 2; Bacteria - 42; Metazoa - 115; Fungi - 0; Plants - 290; Viruses - 0; Other Eukaryotes - 103 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||
Protein Annotations |
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Coordinates (TAIR10) | chr5:+:18346862..18349432 | ||||||||||||||||||||||||||||||||||||||||||||||||
Molecular Weight (calculated) | 40791.60 Da | ||||||||||||||||||||||||||||||||||||||||||||||||
IEP (calculated) | 10.25 | ||||||||||||||||||||||||||||||||||||||||||||||||
GRAVY (calculated) | -0.09 | ||||||||||||||||||||||||||||||||||||||||||||||||
Length | 370 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
001: MTWLKQMWSS ILVLAVVVIG ARAVPITYLE SAVAKGAVCL DGSAPAYHFD KGSGSGVNNW IVHMEGGGWC TDIATCVQRK STMKGSSKLM NKDFGFSGIL 101: GGKQSTNPDF YNWNRIKVRY CDGSSFTGDI EAVDPTHKLF FRGARVWRAV IDDLMAKGMS NAQNAILSGC SAGALAAILH CDQFKSTLPK TAKVKCVSDA 201: GYFIHGKDIT GGSYIQSYYA KVVATHGSAK SLPASCTSSM KPDLCFFPQY VAKTLQTPLF VINAAFDSWQ IKNVLAPTSV DKSKAWKTCK LDLKKCTAAQ 301: LQTVQETKCW LRWRLFDPRR RTDCSWTRAM LIAKVEALPL GPATKVPQSR IRKWLRRLEI GSLRGVRFRT |
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See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)