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AT5G45280.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
extracellular 1.000
ASURE: extracellular
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31673584 (2019): extracellular region plant-type cell wall
  • PMID:30783145 (2019): extracellular region plant-type cell wall
  • PMID:28818374 (2017): extracellular region plant-type cell wall
  • PMID:28155257 (2017): extracellular region plant-type cell wall
  • PMID:26572690 (2016): extracellular region plant-type cell wall
  • PMID:25852701 (2015): extracellular region apoplast
  • PMID:22923678 (2012): plasma membrane
  • PMID:16356755 (2006): extracellular region
  • PMID:15593128 (2005): extracellular region
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Pectinacetylesterase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Pectinacetylesterase family protein; FUNCTIONS IN: carboxylesterase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectinacetylesterase (InterPro:IPR004963); BEST Arabidopsis thaliana protein match is: Pectinacetylesterase family protein (TAIR:AT4G19410.2); Has 552 Blast hits to 548 proteins in 96 species: Archae - 2; Bacteria - 42; Metazoa - 115; Fungi - 0; Plants - 290; Viruses - 0; Other Eukaryotes - 103 (source: NCBI BLink).
Protein Annotations
EC:3.1.1.-eggNOG:ENOG410XQKDeggNOG:KOG4287EMBL:AB020744
EMBL:AY056198EMBL:AY057665EMBL:AY087860EMBL:AY150453
EMBL:CP002688EnsemblPlants:AT5G45280EnsemblPlants:AT5G45280.1EnsemblPlants:AT5G45280.2
entrez:834564ESTHER:arath-q8lae9ExpressionAtlas:Q9FH82GeneID:834564
Genevisible:Q9FH82GO:GO:0005576GO:GO:0005618GO:GO:0005829
GO:GO:0005886GO:GO:0009506GO:GO:0016787GO:GO:0071555
hmmpanther:PTHR21562hmmpanther:PTHR21562:SF4HOGENOM:HOG000238558InterPro:IPR004963
KEGG:ath:AT5G45280OMA:CTDIATCPANTHER:PTHR21562PaxDb:Q9FH82
Pfam:PF03283PhylomeDB:Q9FH82PRIDE:Q9FH82PRO:PR:Q9FH82
ProteinModelPortal:Q9FH82Proteomes:UP000006548RefSeq:NP_199341.1RefSeq:NP_851135.1
SMR:Q9FH82STRING:3702.AT5G45280.2SwissPalm:Q9FH82TAIR:AT5G45280
TMHMM:TMhelixUniGene:At.24293UniProt:Q93ZX9
Coordinates (TAIR10) chr5:+:18346862..18349432
Molecular Weight (calculated) 40791.60 Da
IEP (calculated) 10.25
GRAVY (calculated) -0.09
Length 370 amino acids
Sequence (TAIR10)
(BLAST)
001: MTWLKQMWSS ILVLAVVVIG ARAVPITYLE SAVAKGAVCL DGSAPAYHFD KGSGSGVNNW IVHMEGGGWC TDIATCVQRK STMKGSSKLM NKDFGFSGIL
101: GGKQSTNPDF YNWNRIKVRY CDGSSFTGDI EAVDPTHKLF FRGARVWRAV IDDLMAKGMS NAQNAILSGC SAGALAAILH CDQFKSTLPK TAKVKCVSDA
201: GYFIHGKDIT GGSYIQSYYA KVVATHGSAK SLPASCTSSM KPDLCFFPQY VAKTLQTPLF VINAAFDSWQ IKNVLAPTSV DKSKAWKTCK LDLKKCTAAQ
301: LQTVQETKCW LRWRLFDPRR RTDCSWTRAM LIAKVEALPL GPATKVPQSR IRKWLRRLEI GSLRGVRFRT
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)