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AT3G54030.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Protein kinase protein with tetratricopeptide repeat domain
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Protein kinase protein with tetratricopeptide repeat domain; FUNCTIONS IN: binding, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase protein with tetratricopeptide repeat domain (TAIR:AT5G59010.1); Has 33259 Blast hits to 32742 proteins in 1298 species: Archae - 16; Bacteria - 2417; Metazoa - 7041; Fungi - 251; Plants - 21929; Viruses - 104; Other Eukaryotes - 1501 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT3G54030-MONOMEReggNOG:ENOG410IVG3eggNOG:ENOG410XQTVEMBL:AL132960
EMBL:AY054503EMBL:BT002089EMBL:CP002686EnsemblPlants:AT3G54030
EnsemblPlants:AT3G54030.1entrez:824570Gene3D:1.25.40.10GeneID:824570
GO:GO:0004672GO:GO:0005524GO:GO:0005886Gramene:AT3G54030.1
hmmpanther:PTHR27001hmmpanther:PTHR27001:SF201InterPro:IPR000719InterPro:IPR001245
InterPro:IPR011009InterPro:IPR011990KEGG:ath:AT3G54030OMA:IPHETEA
Pfam:PF07714Pfscan:PS50011PhylomeDB:Q9M324PROSITE:PS50011
Proteomes:UP000006548RefSeq:NP_190971.1SMR:Q9M324STRING:3702.AT3G54030.1
SUPFAM:SSF48452SUPFAM:SSF56112TAIR:AT3G54030UniGene:At.1414
UniProt:Q9M324
Coordinates (TAIR10) chr3:+:20011162..20013490
Molecular Weight (calculated) 54792.40 Da
IEP (calculated) 6.51
GRAVY (calculated) -0.32
Length 490 amino acids
Sequence (TAIR10)
(BLAST)
001: MGARCSKFSF CLFPSHFKSA SVLESPDIEN GGKVWPTFKE FKLEQLKSAT GGFSSDNIVS EHGEKAPNVV YRGRLDDGRL IAVKRFNRLA WADHRQFLDE
101: AKAVGSLRSD RLANLIGCCF EGEERLLVAE FMPHETLAKH LFHWENNPMK WAMRLRVALC LAQALEYCSN KGRALYHDLN AYRVLFDKDG NPRLSCFGLM
201: KNSRDGKSYS TNLAFTPPEY LRTGRVTPES VVFSFGTVLL DLMSGKHIPP SHALDLIRGK NCAMLMDSAL EGHFSNEDGT ELVRLATRCL QYEARERPNV
301: KSLVTSLVTL QKESDVASYV LMGIPHETEA EEESPLSLTP FGDACLRVDL TAIQEILSKI GYKDDEGIAN ELSFQMWTNQ MQESLNSKKQ GDLAFRSKDF
401: TTAVDCYTQF IDGGTMVSPT VHARRCLSYL MNDNAQEALT DALQAQVVSP DWPTALYLQA ACLFKLGMEA DAQQALKDGT TLEAKKSNKR
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)