AT5G44520.1
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:plastid 1.000 What is SUBAcon? |
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Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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Description (TAIR10) | protein_coding : NagB/RpiA/CoA transferase-like superfamily protein | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Curator Summary (TAIR10) |
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Computational Description (TAIR10) |
NagB/RpiA/CoA transferase-like superfamily protein; FUNCTIONS IN: ribose-5-phosphate isomerase activity; INVOLVED IN: glucose catabolic process to lactate and acetate, 5-phosphoribose 1-diphosphate biosynthetic process, reductive pentose-phosphate cycle, D-ribose catabolic process, pentose-phosphate shunt, non-oxidative branch; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ribose 5-phosphate isomerase, type A (InterPro:IPR004788); BEST Arabidopsis thaliana protein match is: Ribose 5-phosphate isomerase, type A protein (TAIR:AT3G04790.1); Has 2560 Blast hits to 2560 proteins in 1021 species: Archae - 184; Bacteria - 1763; Metazoa - 86; Fungi - 39; Plants - 144; Viruses - 0; Other Eukaryotes - 344 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Protein Annotations |
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Coordinates (TAIR10) | chr5:-:17934610..17936441 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Molecular Weight (calculated) | 32165.30 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||
IEP (calculated) | 4.92 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
GRAVY (calculated) | 0.01 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Length | 296 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
001: MVTATASTPF SLSSSVVFTR RRNFKRFPVC ASLSPEVSPL LRAAHHTVDN YVKSGMIIGL GSGEASDFAI RYLGQQLGSG SLHNVVGVPM SARSASEAAK 101: YGIPLEYYRD GVQIDFAFHD ADAVEENTLI AVIGRRRSSQ EDDYILKQKS IVKVADEAVF MIKEEQYKAG LEGSIPVLVQ SLNWLAIAEE IDDLYLGDAE 201: VWRRASVENE GPLGGDFPIV TSDGHNILDV IFTTPIRSLA DLATSLDKID GVVDHGLIIK TRCTVVIAEE TVVRSVTLQT SALEGGVRTY GQTLQK |
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See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)