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AT4G20760.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
mitochondrion 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : NAD(P)-binding Rossmann-fold superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT5G51030.1); Has 50499 Blast hits to 50443 proteins in 2986 species: Archae - 509; Bacteria - 33822; Metazoa - 3124; Fungi - 3071; Plants - 1791; Viruses - 1; Other Eukaryotes - 8181 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG4111VKYeggNOG:KOG1611EMBL:AY052312EMBL:BT000860
EMBL:CP002687EnsemblPlants:AT4G20760EnsemblPlants:AT4G20760.1entrez:827824
Gene3D:3.40.50.720GeneID:827824GO:GO:0016491Gramene:AT4G20760.1
hmmpanther:PTHR24322hmmpanther:PTHR24322:SF540InterPro:IPR002347InterPro:IPR016040
KEGG:ath:AT4G20760OMA:NIPQLDWPANTHER:PTHR24322Pfam:PF00106
PhylomeDB:Q941A7PRINTS:PR00080PRINTS:PR00081Proteomes:UP000006548
RefSeq:NP_193808.2SMR:Q941A7STRING:3702.AT4G20760.1SUPFAM:SSF51735
TAIR:AT4G20760UniGene:At.48888UniProt:Q941A7
Coordinates (TAIR10) chr4:+:11129043..11130541
Molecular Weight (calculated) 32481.10 Da
IEP (calculated) 10.24
GRAVY (calculated) -0.22
Length 298 amino acids
Sequence (TAIR10)
(BLAST)
001: MNTLVRSGGA WLVSPSMAVA ALKRMRVSGL ATSSSSSVPN WKGGVSMVQG ASRGIGLEFV RQLLENNKNG YVVATCRNPK EATSLSDLKN RFSERLFIQK
101: LDVTDETTIE ESAESVREKY GSLNLLINAA GILSIPGVLQ PETTLNKVEK SSLMLAYEVN AVGPILVMKH MWPLLKAGGG SGTDREVAVV ANLSARVGSI
201: GDNRLGGWHS YRASKSALNQ LTKNVSVELG RRKDPVACIL LHPGTVDTDL SRPFQRNVPD GKLFTREYSV QKLLHIINNT KKQDSGKFFA WDGQEIPW
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)