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AT3G52750.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plastid 1.000
ASURE: plastid
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31932409 (2020): plastid
  • PMID:31818904 (2020): mitochondrion
  • PMID:31615849 (2019): plastid plastid thylakoid
  • PMID:30135097 (2018): plastid
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:27137770 (2016): plastid plastid stroma
  • PMID:25900983 (2015): Golgi
  • PMID:25900983 (2015): Golgi trans-Golgi network multivesicular body
  • PMID:25900983 (2015): Golgi trans-Golgi network
  • PMID:24872594 (2014): plastid plastid stroma
  • PMID:24872594 (2014): plastid plastid thylakoid
  • PMID:24361574 (2014): plastid plastid stroma
  • PMID:24124904 (2013): plastid
  • PMID:23851315 (2013): plastid
  • PMID:23673981 (2013): plastid plastid stroma plastoglobules
  • PMID:23549413 (2013): plastid plastid stroma
  • PMID:21531424 (2011): plastid
  • PMID:21311031 (2011): plastid
  • PMID:20423899 (2010): plastid
  • PMID:20061580 (2010): plastid plastid thylakoid
  • PMID:20061580 (2010): plastid plastid stroma
  • PMID:18431481 (2008): plastid plastid stroma
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : Tubulin/FtsZ family protein
Curator
Summary (TAIR10)
Nuclear gene that encodes a plastidial division protein (FtsZ2-2).
Computational
Description (TAIR10)
FTSZ2-2; FUNCTIONS IN: structural molecule activity, GTP binding, GTPase activity; INVOLVED IN: protein polymerization; LOCATED IN: chloroplast stroma, chloroplast, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cell division protein FtsZ, N-terminal (InterPro:IPR000158), Cell division protein FtsZ, conserved site (InterPro:IPR020805), Tubulin/FtsZ, GTPase domain (InterPro:IPR003008), Tubulin/FtsZ, N-terminal (InterPro:IPR019746), Tubulin/FtsZ, C-terminal (InterPro:IPR008280), Tubulin/FtsZ, 2-layer sandwich domain (InterPro:IPR018316); BEST Arabidopsis thaliana protein match is: Tubulin/FtsZ family protein (TAIR:AT2G36250.2); Has 10464 Blast hits to 10464 proteins in 3156 species: Archae - 455; Bacteria - 6195; Metazoa - 8; Fungi - 0; Plants - 153; Viruses - 0; Other Eukaryotes - 3653 (source: NCBI BLink).
Protein Annotations
BioGrid:9758eggNOG:COG0206eggNOG:ENOG410IEJ4EMBL:AF384167
EMBL:AL353912EMBL:AY056331EMBL:AY150504EMBL:CP002686
EnsemblPlants:AT3G52750EnsemblPlants:AT3G52750.1entrez:824441Gene3D:3.30.1330.20
Gene3D:3.40.50.1440GeneID:824441Genevisible:Q9LXJ0GO:GO:0003924
GO:GO:0005525GO:GO:0009507GO:GO:0009532GO:GO:0009534
GO:GO:0009535GO:GO:0009570GO:GO:0009658GO:GO:0010020
GO:GO:0016020GO:GO:0042651GO:GO:0042802GO:GO:0043621
Gramene:AT3G52750.1HAMAP:MF_00909hmmpanther:PTHR30314hmmpanther:PTHR30314:SF13
HOGENOM:HOG000049094InParanoid:Q9LXJ0IntAct:Q9LXJ0InterPro:IPR000158
InterPro:IPR003008InterPro:IPR008280InterPro:IPR018316InterPro:IPR020805
InterPro:IPR024757iPTMnet:Q9LXJ0KEGG:ath:AT3G52750KO:K03531
OMA:GDNSRSHPaxDb:Q9LXJ0Pfam:PF00091Pfam:PF12327
Pfam:Q9LXJ0PhylomeDB:Q9LXJ0PIR:T49028PRIDE:Q9LXJ0
PRINTS:PR00423PRO:PR:Q9LXJ0PROSITE:PS01135ProteinModelPortal:Q9LXJ0
Proteomes:UP000006548RefSeq:NP_190843.1scanprosite:PS01135SMART:SM00864
SMART:SM00865SMR:Q9LXJ0STRING:3702.AT3G52750.1SUPFAM:SSF52490
SUPFAM:SSF55307TAIR:AT3G52750tair10-symbols:FTSZ2-2TIGRfam:TIGR00065
TIGRFAMs:TIGR00065UniGene:At.1742UniProt:Q9LXJ0
Coordinates (TAIR10) chr3:-:19549841..19552435
Molecular Weight (calculated) 50320.20 Da
IEP (calculated) 5.75
GRAVY (calculated) -0.06
Length 473 amino acids
Sequence (TAIR10)
(BLAST)
001: MAAYVSPCLT PPDSRVLTVL RKSVLPDHHL GTRVGCLRMS EGTTKRYRVV ASHKYESSSI RNSLNSHSTS HFQSQDSFLN LHPEISMLNP RKETSSVPIT
101: EDLDELSTPN TYNEARIKVI GVGGGGSNAV NRMIESEMIG VEFWIVNTDI QAMRISPVFP DNRLQIGKEL TRGLGAGGNP EIGMNAATES KEAIQEALYG
201: SDMVFVTAGM GGGTGTGGAP IIAGVAKAMG ILTVGIVTTP FSFEGRRRAL QAQEGIAALR DNVDTLIVIP NDKLLAAVSQ STPVTEAFNL ADDILRQGVR
301: GISDIITIPG LVNVDFADVR AIMANAGSSL MGIGTATGKT RARDAALNAI QSPLLDIGIE RATGIVWNIT GGSDLTLFEV NAAAEVIYDL VDPTANLIFG
401: AVVDPSYSGQ ISITLIATGF KRQEEGEGRP LQATQADASM GATRRPSSSF TEGSSIEIPE FLKKKGRSRY PRL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)