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AT5G44010.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
cytosol 0.950
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; Has 28 Blast hits to 26 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 28; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IKGAeggNOG:ENOG410YG5BEMBL:CP002688EnsemblPlants:AT5G44010
EnsemblPlants:AT5G44010.1entrez:834424GeneID:834424Gramene:AT5G44010.1
InParanoid:F4K7F0KEGG:ath:AT5G44010OMA:QNEIALNPaxDb:F4K7F0
PRIDE:F4K7F0ProteinModelPortal:F4K7F0Proteomes:UP000006548RefSeq:NP_199214.2
STRING:3702.AT5G44010.1TAIR:AT5G44010UniGene:At.30091UniProt:F4K7F0
Coordinates (TAIR10) chr5:-:17707224..17709199
Molecular Weight (calculated) 40792.30 Da
IEP (calculated) 5.87
GRAVY (calculated) -0.17
Length 357 amino acids
Sequence (TAIR10)
(BLAST)
001: MVWNYPEISK EDFIKLLKGS INSSDTFGES MRELDEAISE MKSNPLFPKG LENLSSDNLS KGREFVLEHL MNNSTLKDKQ LQAILVAAVE SGDGIREIID
101: GKLCKRQSVV SCVSALETGL KILSKHIEPK ESLHREDNDA TFLGLGQQPI ELLRWNIWQS KAISYFLSKR TLRLVSGASL IFSAPKAQWV EMLRRLRVSD
201: KNDDDIFIEK IELLLLGCVT SRWTHLIEGI MSVSYKSVTV SEEYEELCKL LLQRSKCLKQ NEIALNSKVE EILEYLTEIL ESRFHQLWKL PSALTAAAIP
301: SWSPLFGLYF GGIEKQLKLD HSTTRFCSCD KDLNEHNDCE LAERVWCLYV FHICICH
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)