suba logo
AT3G09660.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

.
SUBAcon:
nucleus 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : minichromosome maintenance 8
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
minichromosome maintenance 8 (MCM8); FUNCTIONS IN: nucleoside-triphosphatase activity, DNA-dependent ATPase activity, DNA binding, nucleotide binding, ATP binding; INVOLVED IN: DNA-dependent DNA replication initiation, DNA replication; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot apex, embryo, flower, seed; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), ATPase, AAA+ type, core (InterPro:IPR003593), DNA-dependent ATPase MCM (InterPro:IPR001208); BEST Arabidopsis thaliana protein match is: Minichromosome maintenance (MCM2/3/5) family protein (TAIR:AT2G16440.1); Has 4027 Blast hits to 3851 proteins in 539 species: Archae - 371; Bacteria - 134; Metazoa - 1249; Fungi - 930; Plants - 423; Viruses - 3; Other Eukaryotes - 917 (source: NCBI BLink).
Protein Annotations
EC:3.6.4.12EMBL:AC016661EMBL:CP002686EMBL:KC109786
EnsemblPlants:AT3G09660EnsemblPlants:AT3G09660.1entrez:820123Gene3D:2.40.50.140
Gene3D:3.40.50.300GeneID:820123Genevisible:Q9SF37GO:GO:0000724
GO:GO:0003677GO:GO:0004386GO:GO:0005524GO:GO:0005634
GO:GO:0006260GO:GO:0007140GO:GO:0007143GO:GO:0009555
GO:GO:0046872Gramene:AT3G09660.1hmmpanther:PTHR11630hmmpanther:PTHR11630:SF47
HOGENOM:HOG000224129InParanoid:Q9SF37InterPro:IPR001208InterPro:IPR003593
InterPro:IPR012340InterPro:IPR027417InterPro:IPR027925InterPro:IPR031327
KEGG:ath:AT3G09660KO:K10737Pfam:PF00493Pfam:PF14551
Pfscan:PS50051PRIDE:Q9SF37PRINTS:PR01657PRO:PR:Q9SF37
PROSITE:PS50051ProteinModelPortal:Q9SF37Proteomes:UP000006548Reactome:R-ATH-68689
Reactome:R-ATH-68867Reactome:R-ATH-68949Reactome:R-ATH-68962RefSeq:NP_187577.1
SMART:SM00350SMART:SM00382SMR:Q9SF37SUPFAM:SSF50249
SUPFAM:SSF52540TAIR:AT3G09660tair10-symbols:MCM8UniGene:At.40062
UniGene:At.53240UniProt:Q9SF37
Coordinates (TAIR10) chr3:-:2961314..2966166
Molecular Weight (calculated) 85885.20 Da
IEP (calculated) 6.75
GRAVY (calculated) -0.18
Length 777 amino acids
Sequence (TAIR10)
(BLAST)
001: MGFYGGGSMA SGRPESTGID SLGIGKILAV YIKDNENLAI DEDKLQLTAE LIRVFSASPG RDIVSQVNED GGGSFSLSLD LQQFKKISDI ENFFINLEDN
101: PKGVIPCMNA AVHKVLFDQW ETNEFENVMK INVRLHNYPE SSISLKNLRA AYIGKLVTVH GTVVKVSTVK PLVTQMAFDC GKCKTGITRE FTDGKFSPPL
201: KCDSHGCKSK TFTPIRSSAQ TIDFQKIRVQ ELQKPEDHEE GRVPRTVECE LMEDLVDICI PGDVVTVTGI IGVINNYMDI GGGKSKTKNQ GFYYLFIEAV
301: SVKNTKRQSA FENSEDSSSS AQTADVGDLY SFSQRDLEFI VKFKEEYGSD TFRRILHSVC PSIYGHEIVK AGITLSLFGG VRKHSMDRNK VPVRGDIHVI
401: IVGDPGLGKS QLLQAAAAIS PRGIYVCGNA TTRAGLTVAV VKDSMTNDYA FEAGAMVLAD GGLCCIDEFD KMTTEHQALL EAMEQQCVSV AKAGLVASLS
501: ARTSVIAAAN PVGGHYNRAK TVNENLKMSA ALLSRFDLVF ILLDKPDELL DKQVSEHIMS HHRMLGMQTC MQKGILYFQD CGWTLRKMTT FLRFLANCLG
601: NIFPMHGILM SKDAGEIIQK FYLKLRDHNT SADSTPITAR QLESLVRLAQ ARARVDLREE ITVQDAMDVV EIMKESLYDK LIDEHGVVDF GRSGGMSQQK
701: EAKRFLSALD KQSELQQKDC FSVSEMYSLA DRIGLRVPDI DTFLENLNIA GYLLKKGPKT YQVLSSSYSR SQSSRSR
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)