AT5G39940.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:mitochondrion 0.875 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : FAD/NAD(P)-binding oxidoreductase family protein | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
FAD/NAD(P)-binding oxidoreductase family protein; CONTAINS InterPro DOMAIN/s: Conserved hypothetical protein CHP00275, flavoprotein HI0933-like (InterPro:IPR004792); Has 4590 Blast hits to 4585 proteins in 1655 species: Archae - 24; Bacteria - 3709; Metazoa - 1; Fungi - 2; Plants - 41; Viruses - 0; Other Eukaryotes - 813 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:+:15987649..15990561 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 52074.60 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 9.78 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.08 | ||||||||||||||||||||||||||||||||||||
| Length | 480 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MSLNLANPVW VPVKALLCRT IRRRRIFTAT AITSLADKGE KDESELLVVV GGGAAGVYGA IRAKTLSPDL RVLVIEKGSF LSKVKISGGG RCNVTNGHCN 101: DTINLAGHYP RGHKELKGSF FYTHGPADTM SWFSEHGVPL KTEDDGRVFP VSDNSLSVVD CLLNEANIRG VRLERGKSVL AASIKPDGKF LVKVGKQSAD 201: TSESIEATYL LIATGSSQKG HSLATKFGHS IVDPVPSLFT FKINDPLLTE LAGISFSKVQ AKLKLDNPCP DLSNLVQIGP MLVTHWGLSG PVILRLSAWG 301: ARYLFSSKYK GHLIVDFIPD INIETAKSVL KEHKLQFSKH KVSNSYPPQF GLVNRFWRYI LDREGSSKDT LWASLSNNSL SSISDLLKHC TFQVTGKGQY 401: KDEFVTAGGV PLSEVSLKTM ESKLVPNLFF AGEVLNVDGV TGGFNFQNAW SGGYIAGTNI GELASSSRIS SKERKVTIGL |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)