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AT1G66520.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
mitochondrion 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : formyltransferase, putative
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
pigment defective 194 (pde194); FUNCTIONS IN: hydroxymethyl-, formyl- and related transferase activity, formyltetrahydrofolate deformylase activity, catalytic activity; INVOLVED IN: purine ribonucleotide biosynthetic process, biosynthetic process; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Formyl transferase, C-terminal (InterPro:IPR005793), Methionine tRNA Formyltransferase-like (InterPro:IPR015518), Formyl transferase, C-terminal-like (InterPro:IPR011034), Formyl transferase, N-terminal (InterPro:IPR002376); Has 18100 Blast hits to 18093 proteins in 2820 species: Archae - 107; Bacteria - 12760; Metazoa - 410; Fungi - 163; Plants - 151; Viruses - 3; Other Eukaryotes - 4506 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G66520-MONOMEReggNOG:COG0223eggNOG:KOG3082EMBL:AC074025
EMBL:CP002684EnsemblPlants:AT1G66520EnsemblPlants:AT1G66520.1entrez:842970
Gene3D:3.10.25.10Gene3D:3.40.50.170GeneID:842970GO:GO:0004479
GO:GO:0005739GO:GO:0006413Gramene:AT1G66520.1gramene_pathway:2.1.2.2
gramene_pathway:PWY-6121HAMAP:MF_00182hmmpanther:PTHR11138hmmpanther:PTHR11138:SF3
InterPro:IPR002376InterPro:IPR005793InterPro:IPR005794InterPro:IPR011034
KEGG:00670+2.1.2.9KEGG:00970+2.1.2.9KEGG:ath:AT1G66520KO:K00604
OMA:QRDKPFGPfam:PF00551Pfam:PF02911PhylomeDB:Q9C712
PIR:H96690Proteomes:UP000006548RefSeq:NP_176825.1SMR:Q9C712
STRING:3702.AT1G66520.1SUPFAM:SSF50486SUPFAM:SSF53328TAIR:AT1G66520
tair10-symbols:pde194UniGene:At.26432UniGene:At.35761UniProt:Q9C712
Coordinates (TAIR10) chr1:-:24816330..24818693
Molecular Weight (calculated) 38504.70 Da
IEP (calculated) 9.80
GRAVY (calculated) -0.04
Length 355 amino acids
Sequence (TAIR10)
(BLAST)
001: MILRRFICYN ASSTVSSIAP SPKKKPLIFL GSPQVSVSVL EALFNASNAP NSSFEVAGIV TQPPSRRDRG KKVLPSPVAQ YALDKGLPSD LIFSPEKAGD
101: EAFLSALREL QPELCITAAY GNILPTKFLK IPVHGTVNIH PSLLPLYRGA APVQRALQDG VPETGVSLAF TVRKLDAGPV IASKRFQVDD LIKAPELLSF
201: LFSEGSNLLI RELPSIFDGS AKSKAAPQDD SKATLAPKIA PDEAWLSFDQ EAFVLHNKVR AFAGWPGTRA KVVVLDEKSG QQNVLELKIM STRVCKDLEI
301: QDSEQDYVTF KKGSLIFPCR GGTALEVLEV QLPGKKAINA AAFWNGLRGQ KLKKL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)