AT5G38040.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:mitochondrion 0.997 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : UDP-Glycosyltransferase superfamily protein | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups, UDP-glycosyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot apex, stem, embryo, sepal, seed; EXPRESSED DURING: petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G38010.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:+:15185077..15186508 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 50622.40 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 5.41 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.04 | ||||||||||||||||||||||||||||||||||||||||
| Length | 449 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MEEKLSRRRR VVLVPVPAQG HITPMIQLAK ALHSKGFSIT VVQTKFNYLN PSNDLSDFQF VTIPENLPVS DLKNLGPGRF LIKLANECYV SFKDLLGQLL 101: VNEEEEIACV IYDEFMYFVE VAVKEFKLRN VILSTTSATA FVCRFVMCEL YAKDGLAQLK EGGEREVELV PELYPIRYKD LPSSVFASVE SSVELFKNTC 201: YKGTASSVII NTVRCLEMSS LEWLQQELEI PVYSIGPLHM VVSAPPTSLL EENESCIEWL NKQKPSSVIY ISLGSFTLME TKEMLEMAYG FVSSNQHFLW 301: VIRPGSICGS EISEEELLKK MVITDRGYIV KWAPQKQVLA HSAVGAFWSH CGWNSTLESL GEGVPLICRP FTTDQKGNAR YLECVWKVGI QVEGELERGA 401: IERAVKRLMV DEEGEEMKRR ALSLKEKLKA SVLAQGSSHK SLDDFIKTL |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)