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AT5G26770.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
golgi 0.590
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G05830.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IJ7QeggNOG:ENOG410YB4YEMBL:CP002688EnsemblPlants:AT5G26770
EnsemblPlants:AT5G26770.1EnsemblPlants:AT5G26770.2entrez:832735ExpressionAtlas:F4K1B4
GeneID:832735Gramene:AT5G26770.1Gramene:AT5G26770.2ncoils:Coil
OMA:IEHDIMQProteomes:UP000006548RefSeq:NP_568487.1RefSeq:NP_974840.1
SMR:F4K1B4STRING:3702.AT5G26770.1SUPFAM:SSF90257TAIR:AT5G26770
UniGene:At.30845UniProt:F4K1B4
Coordinates (TAIR10) chr5:-:9407981..9409735
Molecular Weight (calculated) 38677.70 Da
IEP (calculated) 8.87
GRAVY (calculated) -0.75
Length 335 amino acids
Sequence (TAIR10)
(BLAST)
001: MSDSVKTTVD PLLKDLDGKK ESFRRNVVSM AAELKQVRGR LVSQEQFFVK ESFCRKEAEK KAKNMEMEIC KLQKKLEDRN CELVASTSAA EKFLEEVDDL
101: RSQLALTKDI AETSAASAQS AQLQCSVLTE QLDDKTRSLR EHEDRVTHLG HQLDNLQRDL KTRECSQKQL REEVMRIERE ITEAVAKSGK GTECELRKLL
201: EEVSPKNFER MNMLLAVKDE EIAKLKDDVK LMSAHWKLKT KELESQLERQ RRADQELKKK VLKLEFCLQE ARSQTRKLQR AGERRDKAIK ELSDQITGKQ
301: LNESVSGEKQ NFWDTSGFKI VVSMSMLILV IISKR
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)