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AT5G24260.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
cytosol 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : prolyl oligopeptidase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
prolyl oligopeptidase family protein; FUNCTIONS IN: serine-type peptidase activity; INVOLVED IN: proteolysis; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S9, prolyl oligopeptidase, catalytic domain (InterPro:IPR001375), Peptidase S9B, dipeptidylpeptidase IV N-terminal (InterPro:IPR002469); BEST Arabidopsis thaliana protein match is: acylaminoacyl-peptidase-related (TAIR:AT4G14570.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT5G24260-MONOMEReggNOG:COG1506eggNOG:KOG2281EMBL:AB006701
EMBL:AK227196EMBL:BT008638EMBL:CP002688EnsemblPlants:AT5G24260
EnsemblPlants:AT5G24260.1entrez:832493ESTHER:arath-Q9FNF6Gene3D:2.140.10.30
Gene3D:3.40.50.1820GeneID:832493GO:GO:0005829GO:GO:0008236
Gramene:AT5G24260.1hmmpanther:PTHR11731hmmpanther:PTHR11731:SF110HOGENOM:HOG000287360
InterPro:IPR001375InterPro:IPR002469InterPro:IPR029058KEGG:ath:AT5G24260
KO:K01278MEROPS:S09.A03OMA:PCEARAYPfam:PF00326
Pfam:PF00930PhylomeDB:Q9FNF6Proteomes:UP000006548RefSeq:NP_197814.1
SMR:Q9FNF6STRING:3702.AT5G24260.1SUPFAM:SSF53474SUPFAM:SSF82171
TAIR:AT5G24260UniGene:At.30969UniProt:Q9FNF6
Coordinates (TAIR10) chr5:-:8234865..8237810
Molecular Weight (calculated) 83856.00 Da
IEP (calculated) 6.70
GRAVY (calculated) -0.36
Length 746 amino acids
Sequence (TAIR10)
(BLAST)
001: MADKDVPFGV EDIVQTPLPG YVAPTAVSFS PDDSLITYLF SPEKNLKRRV YAFDVNKGES NLVFSPPDGG VDESNISPEE KLRRERLRER GLGVTRYEWV
101: KTNSKMRFIV VPLPAGVYMK DLSSSPNPEL IVPSSPTSPI IDPRLSPNGL FLAYVRESEL HVLNLLKNQT QQLTSGANGS TLSHGLAEYI AQEEMDRRNG
201: YWWSLDSKFI AYTEVDSSQI PLFRIMHQGK RSVGSEAQED HAYPFAGALN STLRLGVVSS AGGGKTTWMN LVCGGRGNTE DEYLGRVNWL PGNVLIVQVL
301: NRSQSKLKII SFDINTGQGN VLLTEESDTW VTLHDCFTPL EKVPSSRGSG GFIWASERTG FRHLYLYESD GTCLGAITSG EWMVEQIAGV NEPMSLVYFT
401: GTLDGPLETN LYCAKLEAGN TSRCQPMRLT HGKGKHIVVL DHQMKNFVDI HDSVDSPPRV SLCSLSDGTV LKILYEQTSP IQILKSLKLE PPEFVQIQAN
501: DGKTTLYGAV YKPDSSKFGP PPYKTMINVY GGPSVQLVYD SWINTVDMRT QYLRSRGILV WKLDNRGTAR RGLKFESWMK HNCGYVDAED QVTGAKWLIE
601: QGLAKPDHIG VYGWSYGGYL SATLLTRYPE IFNCAVSGAP VTSWDGYDSF YTEKYMGLPT EEERYLKSSV MHHVGNLTDK QKLMLVHGMI DENVHFRHTA
701: RLVNALVEAG KRYELLIFPD ERHMPRKKKD RIYMEQRIWE FIEKNL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)