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AT5G23510.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
cytosol 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G23490.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Protein Annotations
EMBL:BT025798EMBL:CP002688EnsemblPlants:AT5G23510EnsemblPlants:AT5G23510.1
entrez:832416ExpressionAtlas:Q1ECD6GeneID:832416Gramene:AT5G23510.1
hmmpanther:PTHR31149hmmpanther:PTHR31149:SF6HOGENOM:HOG000123635PhylomeDB:Q1ECD6
Proteomes:UP000006548RefSeq:NP_197742.2STRING:3702.AT5G23510.2TAIR:AT5G23510
UniGene:At.50477UniProt:Q1ECD6
Coordinates (TAIR10) chr5:+:7927266..7929016
Molecular Weight (calculated) 30063.40 Da
IEP (calculated) 4.43
GRAVY (calculated) -0.23
Length 271 amino acids
Sequence (TAIR10)
(BLAST)
001: MQPGTSVYES PALNQADETP PISKTVVNDT KNIFYFDDGD DAPLPALENL QISGEPYPGH ELQACGYSIN GTTSCNFEWV CHLEDGSVNY IDGAKKPNYL
101: VTADDVGLCL AIEVQPLDDR NRKGELVKVF ANDNRKIACH PEMQSNIDKT LHTGHASYKV SLAIGFVHIW EAATLSIERE GYTIKCNNDL TITEKFSAST
201: AVKIPFEKPA ELVIIGSDGS EHCLRVDNEW PDISSRDEIV LTLRSFIKTV VFFKALQFIL SLSLQSLEDQ F
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)