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AT5G21070.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.627
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; Has 115 Blast hits to 115 proteins in 34 species: Archae - 1; Bacteria - 36; Metazoa - 0; Fungi - 0; Plants - 60; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IIRAeggNOG:ENOG4111Z7KEMBL:AY054240EMBL:AY079115
EMBL:CP002688EnsemblPlants:AT5G21070EnsemblPlants:AT5G21070.1entrez:832231
GeneID:832231GO:GO:0016021Gramene:AT5G21070.1hmmpanther:PTHR36394
hmmpanther:PTHR36394:SF1KEGG:ath:AT5G21070OMA:HRKLVSPPhylomeDB:Q940N6
Proteomes:UP000006548RefSeq:NP_197606.1TAIR:AT5G21070TMHMM:TMhelix
UniGene:At.23853UniProt:Q940N6
Coordinates (TAIR10) chr5:+:7156356..7157490
Molecular Weight (calculated) 24215.20 Da
IEP (calculated) 8.32
GRAVY (calculated) 0.77
Length 225 amino acids
Sequence (TAIR10)
(BLAST)
001: MDTFTAEDLS TIGGIATVSL LHSFIPTHWL PFSIVGRAQK WTLSRTLLVT AFGAVLHVIS TSLLGITAIT MANTIAGEET VHKLASLLLV FLGGSYVLLF
101: LAGKGGHTHS HNQPMEKMAV AGLVLVPALS PCATTLPVFL AVGNSKSMMV LAIIVLLFST ILVMTSLVAL SFYGASQLKF HWVERYDKLL VGSVLCLVGI
201: LTLLFHDHDH GGHEAHQLHR KIITL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)