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AT5G18070.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
mitochondrion 0.500
plastid 0.500
ASURE: mitochondrion,plastid
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:24872594 (2014): plastid
  • PMID:21533090 (2011): extracellular region plant-type cell wall
  • PMID:14671022 (2004): mitochondrion
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : phosphoglucosamine mutase-related
Curator
Summary (TAIR10)
encodes a novel protein involved in DNA repair from UV damage. Isolated by functional complementation of E. coli UV-sensitive mutants (UVR genes).
Computational
Description (TAIR10)
DNA-DAMAGE-REPAIR/TOLERATION 101 (DRT101); FUNCTIONS IN: intramolecular transferase activity, phosphotransferases, phosphoacetylglucosamine mutase activity; INVOLVED IN: response to UV, photoreactive repair; LOCATED IN: cytosol, mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Alpha-D-phosphohexomutase, C-terminal (InterPro:IPR005843), Alpha-D-phosphohexomutase, alpha/beta/alpha domain III (InterPro:IPR005846), Phosphoacetylglucosamine mutase (InterPro:IPR016657), Alpha-D-phosphohexomutase, alpha/beta/alpha domain II (InterPro:IPR005845), Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III (InterPro:IPR016055), Alpha-D-phosphohexomutase, alpha/beta/alpha domain I (InterPro:IPR005844); Has 6617 Blast hits to 6213 proteins in 2284 species: Archae - 117; Bacteria - 4667; Metazoa - 169; Fungi - 157; Plants - 47; Viruses - 0; Other Eukaryotes - 1460 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT5G18070-MONOMEREC:5.4.2.3eggNOG:COG1109eggNOG:KOG2537
EMBL:AB012246EMBL:AY075620EMBL:CP002688EMBL:L11367
EnsemblPlants:AT5G18070EnsemblPlants:AT5G18070.1entrez:831926Gene3D:3.30.310.50
Gene3D:3.40.120.10GeneID:831926Genevisible:P57750GO:GO:0004610
GO:GO:0005739GO:GO:0005829GO:GO:0005975GO:GO:0006048
GO:GO:0006281GO:GO:0009506GO:GO:0046872Gramene:AT5G18070.1
gramene_pathway:5.4.2.2gramene_pathway:5.4.2.3gramene_pathway:PWY-5661gramene_pathway:PWY-621
gramene_pathway:PWY-622gramene_pathway:PWY-842gramene_pathway:PWYQT-4437gramene_pathway:PWYQT-4466
gramene_pathway:SUCSYN-PWYgramene_pathway:UDPNACETYLGALSYN-PWYgramene_plant_reactome:1119386gramene_plant_reactome:6874361
hmmpanther:PTHR22573hmmpanther:PTHR22573:SF15HOGENOM:HOG000210027InParanoid:P57750
InterPro:IPR005843InterPro:IPR005844InterPro:IPR005846InterPro:IPR016055
InterPro:IPR016657iPTMnet:P57750KEGG:00520+5.4.2.10KEGG:00520+5.4.2.3
KEGG:ath:AT5G18070KO:K01836OMA:KPNERCCPaxDb:P57750
Pfam:P57750Pfam:PF00408Pfam:PF02878Pfam:PF02880
PhylomeDB:P57750PIR:S35270PIRSF:PIRSF016408PRIDE:P57750
PRO:PR:P57750ProteinModelPortal:P57750Proteomes:UP000006548Reactome:R-ATH-446210
RefSeq:NP_568359.2SMR:P57750STRING:3702.AT5G18070.1SUPFAM:SSF53738
SUPFAM:SSF55957TAIR:AT5G18070tair10-symbols:DRT101UniGene:At.466
UniPathway:UPA00113UniProt:P57750
Coordinates (TAIR10) chr5:+:5981117..5982787
Molecular Weight (calculated) 60393.90 Da
IEP (calculated) 4.90
GRAVY (calculated) -0.15
Length 556 amino acids
Sequence (TAIR10)
(BLAST)
001: MDEIQIASIL KSSELFPIPQ GVKLSYGTAG FRGDAKLLES TVYRVGILSA LRSLKLGSAT VGLMITASHN KVSDNGIKVS DPSGFMLSQE WEPFADQIAN
101: ASSPEELVSL IRKFMEKEEI AIGENNKGAE VWLGRDTRPS GESLLRAGEI GVGSILGSVA IDIGILTTPQ LHWMVRAKNK GLKATENDYF ENLSTSFRCL
201: IDLIPSSGND KLEISKLLVD GANGVGGQKI EKLRGSLSNL DVEIRNTGRD GGVLNEGVGA DFVQKEKVLP VGFGFKDVGM RCASLDGDAD RLVYFYIPSD
301: SSEKVELLDG DKILSLFALF IKEQLNALED DEERKQSRLG VVQTAYANGA STDYLKHLGL DVVFAKTGVK HLHEKAAEFD IGIYFEANGH GTILFSESFL
401: SWLVSKQKDL TAKGQGGSEE HKAVSRLMAV SNLINQAVGD ALSGVLLVEV ILQHLGWSIE KWNELYKDLP SRQIKVEVPD RTAVVTTSEE TEALRPMGIQ
501: DAINSEIKKY SRGRAFIRPS GTEDVVRVYA EASTQEDADS LANSVAQLVK SFLGSS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)