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AT5G14640.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 0.677
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : shaggy-like kinase 13
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
shaggy-like kinase 13 (SK13); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: response to salt stress, hyperosmotic response; LOCATED IN: cytosol; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: shaggy-related kinase 11 (TAIR:AT5G26751.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT5G14640-MONOMERBioGrid:16593EC:2.7.11.1eggNOG:COG0515
eggNOG:KOG0658EMBL:AL163792EMBL:AY065043EMBL:BT010466
EMBL:CP002688EnsemblPlants:AT5G14640EnsemblPlants:AT5G14640.1entrez:831316
GeneID:831316Genevisible:Q8VZD5GO:GO:0004674GO:GO:0005524
GO:GO:0005829GO:GO:0006972GO:GO:0009651GO:GO:0046777
Gramene:AT5G14640.1hmmpanther:PTHR24057HOGENOM:HOG000233017InParanoid:Q8VZD5
IntAct:Q8VZD5InterPro:IPR000719InterPro:IPR008271InterPro:IPR011009
InterPro:IPR017441iPTMnet:Q8VZD5KEGG:ath:AT5G14640KO:K03083
OMA:MEAIVHPPaxDb:Q8VZD5Pfam:PF00069Pfam:Q8VZD5
Pfscan:PS50011PhylomeDB:Q8VZD5PIR:T48637PRIDE:Q8VZD5
PRO:PR:Q8VZD5PROSITE:PS00107PROSITE:PS00108PROSITE:PS50011
ProteinModelPortal:Q8VZD5Proteomes:UP000006548Reactome:R-ATH-3371453RefSeq:NP_196968.2
scanprosite:PS00107scanprosite:PS00108SMART:SM00220SMR:Q8VZD5
STRING:3702.AT5G14640.1SUPFAM:SSF56112TAIR:AT5G14640tair10-symbols:ATSK13
tair10-symbols:SK13UniGene:At.28278UniProt:Q8VZD5
Coordinates (TAIR10) chr5:-:4719350..4721772
Molecular Weight (calculated) 46077.00 Da
IEP (calculated) 8.64
GRAVY (calculated) -0.23
Length 410 amino acids
Sequence (TAIR10)
(BLAST)
001: MASVGTLPAS SMATKQSNAS ICAEKLPEGI NEMKIKDDKE MEAAVVDGNG TETGHIIVTT IGGKNGQPKQ TISYMAERIV GQGSFGIVFQ AKCLETGETV
101: AIKKVLQDKR YKNRELQTMR LLDHPNVVSL KHCFFSTTEK DELYLNLVLE YVPETVYRVS KHYSRANQRM PIIYVKLYTY QICRALAYIH GGVGVCHRDI
201: KPQNLLVNPH THQVKLCDFG SAKVLVKGEP NISYICSRYY RAPELIFGAT EYTTTIDIWS AGCVLAELLL GQPLFPGESG VDQLVEIIKV LGTPTREEIK
301: CMNPNYTEFK FPQIKAHPWH KIFHKRTPPE AVDLVSRLLQ YSPNLRSTAM EAIVHPFFDE LRDPNTRLPN GRALPPLFNF KPQELKGASL ELLSKLIPDH
401: ARKQCSFLAL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)