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AT2G39450.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
golgi 1.000
ASURE: golgi
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:17559518 (2007): Golgi trans-Golgi network multivesicular body
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Cation efflux family protein
Curator
Summary (TAIR10)
Encodes a Golgi-localized manganese transporter that is involved in Mn tolerance. When expressed into yeast cells, this gene confer Mn<sup>2+</sup> and Cu<sup>2+</sup> tolerance.
Computational
Description (TAIR10)
MTP11; CONTAINS InterPro DOMAIN/s: Cation efflux protein (InterPro:IPR002524); BEST Arabidopsis thaliana protein match is: Cation efflux family protein (TAIR:AT1G79520.1); Has 5154 Blast hits to 5150 proteins in 1777 species: Archae - 162; Bacteria - 4222; Metazoa - 44; Fungi - 292; Plants - 207; Viruses - 0; Other Eukaryotes - 227 (source: NCBI BLink).
Protein Annotations
BioGrid:3868eggNOG:COG0053eggNOG:KOG1485EMBL:AC004218
EMBL:AK317710EMBL:AY136449EMBL:BT008477EMBL:CP002685
EnsemblPlants:AT2G39450EnsemblPlants:AT2G39450.1entrez:818530Gene3D:1.20.1510.10
Gene3D:3.30.70.1350GeneID:818530Genevisible:O80632GO:GO:0000139
GO:GO:0005384GO:GO:0005385GO:GO:0005770GO:GO:0005794
GO:GO:0010042GO:GO:0010043GO:GO:0010486GO:GO:0016020
GO:GO:0016021GO:GO:0030026GO:GO:0031902GO:GO:0046688
GO:GO:0061088GO:GO:0071421GO:GO:0071577Gramene:AT2G39450.1
hmmpanther:PTHR11562hmmpanther:PTHR11562:SF33HOGENOM:HOG000205012InParanoid:O80632
IntAct:O80632InterPro:IPR002524InterPro:IPR027469InterPro:IPR027470
KEGG:ath:AT2G39450OMA:ELHAREHPANTHER:PTHR11562PaxDb:O80632
Pfam:O80632Pfam:PF01545Pfam:PF16916PhylomeDB:O80632
PIR:T00555PRIDE:O80632PRO:PR:O80632ProteinModelPortal:O80632
Proteomes:UP000006548RefSeq:NP_181477.1SMR:O80632STRING:3702.AT2G39450.1
SUPFAM:0054606SUPFAM:SSF160240TAIR:AT2G39450tair10-symbols:ATMTP11
tair10-symbols:MTP11TIGRfam:TIGR01297TIGRFAMs:TIGR01297TMHMM:TMhelix
UniGene:At.21333UniProt:O80632
Coordinates (TAIR10) chr2:-:16471744..16473735
Molecular Weight (calculated) 44633.80 Da
IEP (calculated) 4.87
GRAVY (calculated) 0.03
Length 394 amino acids
Sequence (TAIR10)
(BLAST)
001: MVEPASPDSD EGISLLEFHG NGDRSWQLNF DDFQVSPEHK EKKSPSKLHN CLGCLGPEDN VADYYQQQVE MLEGFTEMDE LAERGFVPGM SKEEQDNLAK
101: SETLAIRISN IANMLLFAAK VYASVTSGSL AIIASTLDSL LDLLSGFILW FTAFSMQTPN PYQYPIGKKR MQPLGILVFA SVMATLGLQI ILESLRTMLS
201: SHKEFNLTKE QESWVVGIML SVTLVKLLLV LYCRSFTNEI VKAYAQDHFF DVITNIIGLI AVILANYIDY WIDPVGAIIL ALYTIRTWSM TVLENVNSLV
301: GKSARPEYLQ KLTYLCWNHH KAIRHIDTVR AYTFGSHYFV EVDIVLPADM PLQVAHDIGE SLQEKLELLE EIERAFVHLD YEYTHKPEHA RSHC
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)