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AT5G13630.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plastid 1.000
ASURE: plastid
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:20543028 (2010): plastid plastid envelope plastid inner membrane
  • PMID:20543028 (2010): plastid plastid envelope plastid outer membrane
  • PMID:19535472 (2009): plastid
  • PMID:31975158 (2020): plastid
  • PMID:31932409 (2020): plastid
  • PMID:31818904 (2020): mitochondrion
  • PMID:31615849 (2019): plastid plastid thylakoid
  • PMID:30962257 (2019): plastid
  • PMID:30135097 (2018): plastid
  • PMID:29967049 (2018): plastid
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:27137770 (2016): plastid plastid stroma
  • PMID:25900983 (2015): Golgi
  • PMID:25900983 (2015): plant-type vacuole plant-type vacuole membrane
  • PMID:25900983 (2015): Golgi trans-Golgi network multivesicular body
  • PMID:25900983 (2015): Golgi trans-Golgi network early endosome
  • PMID:25900983 (2015): Golgi trans-Golgi network
  • PMID:25900983 (2015): Golgi Golgi apparatus Golgi membrane
  • PMID:24872594 (2014): plastid plastid envelope
  • PMID:24872594 (2014): plastid plastid stroma
  • PMID:24124904 (2013): plastid
  • PMID:20061580 (2010): plastid plastid stroma
  • PMID:20061580 (2010): plastid plastid envelope
  • PMID:18431481 (2008): plastid
  • PMID:15028209 (2004): plastid
  • PMID:14671022 (2004): mitochondrion
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : magnesium-chelatase subunit chlH, chloroplast, putative / Mg-protoporphyrin IX chelatase, putative (CHLH)
Curator
Summary (TAIR10)
Encodes magnesium chelatase involved in plastid-to-nucleus signal transduction.
Computational
Description (TAIR10)
GENOMES UNCOUPLED 5 (GUN5); FUNCTIONS IN: magnesium chelatase activity; INVOLVED IN: chlorophyll biosynthetic process, biosynthetic process; LOCATED IN: mitochondrion, magnesium chelatase complex, chloroplast, chloroplast inner membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: CobN/magnesium chelatase (InterPro:IPR003672), Magnesium-chelatase, subunit H (InterPro:IPR011771); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
BioCyc:MetaCyc:AT5G13630-MONOMERBioGrid:16485EC:6.6.1.1eggNOG:COG1429
eggNOG:ENOG410IHVQEMBL:AB006704EMBL:AK317718EMBL:AK317719
EMBL:AY070133EMBL:AY078971EMBL:BT002311EMBL:CP002688
EMBL:Z68495EnsemblPlants:AT5G13630EnsemblPlants:AT5G13630.1entrez:831207
ExpressionAtlas:Q9FNB0GeneID:831207Genevisible:Q9FNB0GO:GO:0005524
GO:GO:0005739GO:GO:0009507GO:GO:0009570GO:GO:0009706
GO:GO:0010007GO:GO:0015979GO:GO:0015995GO:GO:0016851
hmmpanther:PTHR23304hmmpanther:PTHR23304:SF115HOGENOM:HOG000152424InParanoid:Q9FNB0
InterPro:IPR003672InterPro:IPR011771InterPro:IPR022571iPTMnet:Q9FNB0
KEGG:00860+6.6.1.1OMA:ELQEMYLPaxDb:Q9FNB0Pfam:PF02514
Pfam:PF11965Pfam:Q9FNB0PhylomeDB:Q9FNB0PIR:S71288
PRIDE:Q9FNB0PRO:PR:Q9FNB0ProteinModelPortal:Q9FNB0Proteomes:UP000006548
RefSeq:NP_196867.1STRING:3702.AT5G13630.1TAIR:AT5G13630tair10-symbols:ABAR
tair10-symbols:CCHtair10-symbols:CCH1tair10-symbols:CHLHtair10-symbols:GUN5
TIGRfam:TIGR02025TIGRFAMs:TIGR02025UniGene:At.23621UniPathway:UPA00668
UniProt:Q9FNB0
Coordinates (TAIR10) chr5:-:4387567..4392082
Molecular Weight (calculated) 153582.00 Da
IEP (calculated) 5.94
GRAVY (calculated) -0.28
Length 1381 amino acids
Sequence (TAIR10)
(BLAST)
0001: MASLVYSPFT LSTSKAEHLS SLTNSTKHSF LRKKHRSTKP AKSFFKVKSA VSGNGLFTQT NPEVRRIVPI KRDNVPTVKI VYVVLEAQYQ SSLSEAVQSL
0101: NKTSRFASYE VVGYLVEELR DKNTYNNFCE DLKDANIFIG SLIFVEELAI KVKDAVEKER DRMDAVLVFP SMPEVMRLNK LGSFSMSQLG QSKSPFFQLF
0201: KRKKQGSAGF ADSMLKLVRT LPKVLKYLPS DKAQDARLYI LSLQFWLGGS PDNLQNFVKM ISGSYVPALK GVKIEYSDPV LFLDTGIWHP LAPTMYDDVK
0301: EYWNWYDTRR DTNDSLKRKD ATVVGLVLQR SHIVTGDDSH YVAVIMELEA RGAKVVPIFA GGLDFSGPVE KYFVDPVSKQ PIVNSAVSLT GFALVGGPAR
0401: QDHPRAIEAL KKLDVPYLVA VPLVFQTTEE WLNSTLGLHP IQVALQVALP ELDGAMEPIV FAGRDPRTGK SHALHKRVEQ LCIRAIRWGE LKRKTKAEKK
0501: LAITVFSFPP DKGNVGTAAY LNVFASIFSV LRDLKRDGYN VEGLPENAET LIEEIIHDKE AQFSSPNLNV AYKMGVREYQ DLTPYANALE ENWGKPPGNL
0601: NSDGENLLVY GKAYGNVFIG VQPTFGYEGD PMRLLFSKSA SPHHGFAAYY SYVEKIFKAD AVLHFGTHGS LEFMPGKQVG MSDACFPDSL IGNIPNVYYY
0701: AANNPSEATI AKRRSYANTI SYLTPPAENA GLYKGLKQLS ELISSYQSLK DTGRGPQIVS SIISTAKQCN LDKDVDLPDE GLELSPKDRD SVVGKVYSKI
0801: MEIESRLLPC GLHVIGEPPS AMEAVATLVN IAALDRPEDE ISALPSILAE CVGREIEDVY RGSDKGILSD VELLKEITDA SRGAVSAFVE KTTNSKGQVV
0901: DVSDKLTSLL GFGINEPWVE YLSNTKFYRA NRDKLRTVFG FLGECLKLVV MDNELGSLMQ ALEGKYVEPG PGGDPIRNPK VLPTGKNIHA LDPQAIPTTA
1001: AMASAKIVVE RLVERQKLEN EGKYPETIAL VLWGTDNIKT YGESLGQVLW MIGVRPIADT FGRVNRVEPV SLEELGRPRI DVVVNCSGVF RDLFINQMNL
1101: LDRAIKMVAE LDEPVEQNFV RKHALEQAEA LGIDIREAAT RVFSNASGSY SANISLAVEN SSWNDEKQLQ DMYLSRKSFA FDSDAPGAGM AEKKQVFEMA
1201: LSTAEVTFQN LDSSEISLTD VSHYFDSDPT NLVQSLRKDK KKPSSYIADT TTANAQVRTL SETVRLDART KLLNPKWYEG MMSSGYEGVR EIEKRLSNTV
1301: GWSATSGQVD NWVYEEANST FIQDEEMLNR LMNTNPNSFR KMLQTFLEAN GRGYWDTSAE NIEKLKELYS QVEDKIEGID R
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)