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AT5G11410.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
nucleus 0.986
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Protein kinase superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Protein kinase superfamily protein; FUNCTIONS IN: protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G11400.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT5G11410-MONOMEReggNOG:COG0515eggNOG:KOG1187EMBL:AL360314
EMBL:CP002688EnsemblPlants:AT5G11410EnsemblPlants:AT5G11410.1entrez:831012
GeneID:831012GO:GO:0004672GO:GO:0005524Gramene:AT5G11410.1
hmmpanther:PTHR27001hmmpanther:PTHR27001:SF32HOGENOM:HOG000116550InterPro:IPR000719
InterPro:IPR011009KEGG:ath:AT5G11410OMA:QMGKLIKPfam:PF00069
Pfscan:PS50011PhylomeDB:Q9LFL6PROSITE:PS50011Proteomes:UP000006548
RefSeq:NP_196702.1SMR:Q9LFL6STRING:3702.AT5G11410.1SUPFAM:SSF56112
TAIR:AT5G11410UniGene:At.54818UniProt:Q9LFL6
Coordinates (TAIR10) chr5:-:3638431..3639883
Molecular Weight (calculated) 38401.40 Da
IEP (calculated) 9.07
GRAVY (calculated) -0.38
Length 336 amino acids
Sequence (TAIR10)
(BLAST)
001: MGNCLKPLKE QPPSASPKPL TIPSSSVEPV KENLKEFRFA ELNKATKRFR KYMVIKGNDN GFTRTFYEGC INETTFAPSR TGITVSVMEC YQDNSQTLQD
101: WKEEVKSLGR ISHPNLVKLL GYCCEENKSF LVFEYLHKGS LNRYIFGKEE EALPWETRVK IAIGAAQSIA FLHWVKNSAL YRELRMYNIL LDEHYNTKLF
201: YLGSKKLCLL EESVTTAFIG RTVYIPPEYV ISGHLGTKSD VYTFGVILLE ILTGLKASDG KKNENMQSLH VWTKPFLSDQ SKIREIIDPR LGNDYPVNAA
301: TQMGKLIKRC IKLDTRKRPS MQQVFDGLND IAEIKD
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)