AT5G11330.1
|
Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:extracellular 1.000 What is SUBAcon? |
|
||||||||||||||||||||||||||||||||||||
| Experimental Localisations and PPI |
|
||||||||||||||||||||||||||||||||||||
|
SUBAcon links
AGI-AGI relationships |
|
||||||||||||||||||||||||||||||||||||
| Description (TAIR10) | protein_coding : FAD/NAD(P)-binding oxidoreductase family protein | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
|||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
FAD/NAD(P)-binding oxidoreductase family protein; FUNCTIONS IN: oxidoreductase activity, monooxygenase activity; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Monooxygenase, FAD-binding (InterPro:IPR002938); BEST Arabidopsis thaliana protein match is: FAD/NAD(P)-binding oxidoreductase family protein (TAIR:AT2G35660.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
|
||||||||||||||||||||||||||||||||||||
| Coordinates (TAIR10) | chr5:-:3617342..3618861 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 45766.80 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 4.90 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.18 | ||||||||||||||||||||||||||||||||||||
| Length | 408 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MGKKKGKAII VGGSIAGLSC AHSLTLACWD VLVLEKSSEP PVGSPTGAGL GLDPQARQII KSWLTTPQLL DEITLPLSID QNQTTDSEKK VTRILTRDED 101: FDFRAAYWSD IQSLLYNALP QTMFLWGHKF LSFTMSQDES NVKVKTLVVE TQETVEIEGD LLIAADGCLS SIRKTFLPDF KLRYSGYCAW RGVFDFSGNE 201: NSETVSGIKK VYPDLGKCLY FDLGEQTHSV FYELFNKKLN WIWYVNQPEP DLKSNSVTLK VSQEMINKMH QEAETIWIPE LARLMSETKD PFLNVIYDSD 301: PLERIFWGNI VLVGDAAHPT TPHGLRSTNM SILDAEVLGK CLENCGPENV SLGLEEYQRI RLPVVSEQVL YARRLGRIKQ GLDHDGIGDG VFGLEQRNMP 401: FFSCAPLI |
||||||||||||||||||||||||||||||||||||
| See Also |
|
||||||||||||||||||||||||||||||||||||
Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)