AT4G31115.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 0.943 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Protein of unknown function (DUF1997) | ||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Protein of unknown function (DUF1997); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1997 (InterPro:IPR018971); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1997) (TAIR:AT5G04440.1); Has 178 Blast hits to 178 proteins in 45 species: Archae - 0; Bacteria - 51; Metazoa - 0; Fungi - 0; Plants - 75; Viruses - 0; Other Eukaryotes - 52 (source: NCBI BLink). | ||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:+:15130243..15131847 | ||||||||||||||||||||||||
| Molecular Weight (calculated) | 28343.30 Da | ||||||||||||||||||||||||
| IEP (calculated) | 6.67 | ||||||||||||||||||||||||
| GRAVY (calculated) | -0.29 | ||||||||||||||||||||||||
| Length | 250 amino acids | ||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MDIGIRNGWR TPKTSESSGS NFLGLLRSYP NTIPRERIHM GNVHSGKRAM VISSLKKANI SASRKQRIKL EINGEKELTF SEFLKHPSGM EAVINAKALQ 101: SYHLVDDSDD TYRCTLPKVQ LMSFEVYPVL VLRVTPTQED CTVELLSCKL EGSELLENQS ERFSAIMTNC MTWNMEHPEP FLEVDVRLNV TLEISTRPFT 201: MLPVSAVEAP GNLVMQTLVD TLVPLLLQQL LKDYDEWIKK QQRNSLNATS |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)