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AT3G26085.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plastid 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : CAAX amino terminal protease family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
CAAX amino terminal protease family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: proteolysis; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Abortive infection protein (InterPro:IPR003675); Has 1421 Blast hits to 1421 proteins in 498 species: Archae - 13; Bacteria - 1285; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 89 (source: NCBI BLink).
Protein Annotations
EMBL:AY074337EMBL:AY091356EMBL:CP002686EnsemblPlants:AT3G26085
EnsemblPlants:AT3G26085.1entrez:822206ExpressionAtlas:Q8VXZ1GeneID:822206
GO:GO:0008233GO:GO:0016021Gramene:AT3G26085.1hmmpanther:PTHR10794
hmmpanther:PTHR10794:SF52IntAct:Q8VXZ1InterPro:IPR003675MEROPS:M79.A04
Pfam:PF02517PhylomeDB:Q8VXZ1Proteomes:UP000006548RefSeq:NP_566788.1
TAIR:AT3G26085TMHMM:TMhelixUniGene:At.37280UniGene:At.43902
UniProt:Q8VXZ1
Coordinates (TAIR10) chr3:+:9530842..9532397
Molecular Weight (calculated) 31762.50 Da
IEP (calculated) 9.36
GRAVY (calculated) 0.25
Length 293 amino acids
Sequence (TAIR10)
(BLAST)
001: MGSIALQSWS RGASTSLHLL FRPVGSNPKL YDARRVQFDV RASSSRKSLK KLKRESQQGK DIGLRNVTDE EVSSPRFEEA QVDSSTSKDS IDVFVAAPRD
101: KVLQACTVTS GLMAALGLII RKASHVASTE GLLVPDCSID VPFGFETWHL GLIAGIVVFI SSSRFLLLKS WPDFADSSEA ANRQILTSLE PLDYLVVAML
201: PGISEELLFR GALMPLFGTN WNGIVAVGLI FGLLHLGSGR KYSFAVWASI VGIVYGYAAV LSSSLIVPMA SHALNNLVGG LLWRYSSKIK SLE
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)