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AT3G05345.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plastid 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Chaperone DnaJ-domain superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: heat shock protein binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623); BEST Arabidopsis thaliana protein match is: DNAJ heat shock N-terminal domain-containing protein (TAIR:AT5G23240.1); Has 10844 Blast hits to 10844 proteins in 2367 species: Archae - 96; Bacteria - 5912; Metazoa - 1330; Fungi - 441; Plants - 721; Viruses - 3; Other Eukaryotes - 2341 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410J006eggNOG:ENOG4111R5CEMBL:CP002686EnsemblPlants:AT3G05345
EnsemblPlants:AT3G05345.1entrez:7922548Gene3D:1.10.287.110GeneID:7922548
GO:GO:0009507Gramene:AT3G05345.1hmmpanther:PTHR24078InParanoid:F4J794
InterPro:IPR001623KEGG:ath:AT3G05345OMA:YQKPKKQPaxDb:F4J794
Pfam:PF00226Pfam:PF13459Pfscan:PS50076PRINTS:PR00625
PROSITE:PS50076ProteinModelPortal:F4J794Proteomes:UP000006548RefSeq:NP_001154591.1
SMART:SM00271SMR:F4J794SUPFAM:SSF46565TAIR:AT3G05345
UniGene:At.65776UniProt:F4J794
Coordinates (TAIR10) chr3:-:1522449..1523847
Molecular Weight (calculated) 27648.50 Da
IEP (calculated) 6.75
GRAVY (calculated) -0.48
Length 244 amino acids
Sequence (TAIR10)
(BLAST)
001: MECLRVFASV PKISFFSNSR YSTSQRFIPS CRGKNREDPL SSSSPYSILG VEPSCSSSEL KAAFRAKVKQ YHPDVNKDGS NSDIMIRRII QAYEMLTNYS
101: RSEIIEGECL DPFDHPECEA LDVFVNEVLC VGKRCSYPCF ETASHVFSCD SSGTARAMSQ GHGEDYRVQS AVNQCPRNCI HYVTPSQRII LEELLDSVVD
201: KPYDCSAEAE FLYALIVKAK FENNRYQKPK KKQPESSGKH VDWF
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)