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AT3G09050.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plastid 1.000
ASURE: plastid
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; Has 120 Blast hits to 120 proteins in 47 species: Archae - 4; Bacteria - 10; Metazoa - 33; Fungi - 2; Plants - 44; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IW86eggNOG:ENOG410Z0PSEMBL:AC009326EMBL:AK221453
EMBL:BT011671EMBL:CP002686EnsemblPlants:AT3G09050EnsemblPlants:AT3G09050.1
entrez:820058GeneID:820058GO:GO:0009507GO:GO:0009535
Gramene:AT3G09050.1hmmpanther:PTHR35731hmmpanther:PTHR35731:SF1HOGENOM:HOG000030309
KEGG:ath:AT3G09050ncoils:CoilOMA:TQFVYEQPhylomeDB:Q9SS82
Proteomes:UP000006548RefSeq:NP_187517.1STRING:3702.AT3G09050.1TAIR:AT3G09050
UniGene:At.43210UniGene:At.74018UniProt:Q9SS82
Coordinates (TAIR10) chr3:+:2764860..2765907
Molecular Weight (calculated) 29250.40 Da
IEP (calculated) 4.62
GRAVY (calculated) -0.62
Length 258 amino acids
Sequence (TAIR10)
(BLAST)
001: MMNTLHAFQT TLTPNFHVLF NASRHSLSRP QFLCLSKSGD GTSDSDSDPD PPKPEGDTRR QELLARIAMI QTSKVRLTDF LDERSEYLTK FAEEANAEFD
101: KVGEDAMKDL DEASTRILEN IESKMQAFEE SAGLNRLEIE ENDNKLAEFE EKIQVDRNEG LFFKSLRDKK PVDREQAREE TEKIQEVTKE SAGSKSRRNI
201: YLGLIGIVVL AIADSFVSSP DWRKVAILGA ILVPLLTQFV YEQTLLSEAD KGKENKKE
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)