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AT5G09760.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
extracellular 1.000
ASURE: extracellular
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31673584 (2019): extracellular region plant-type cell wall
  • PMID:30783145 (2019): extracellular region apoplast
  • PMID:30783145 (2019): extracellular region plant-type cell wall
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:28155257 (2017): extracellular region plant-type cell wall
  • PMID:26572690 (2016): extracellular region plant-type cell wall
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Plant invertase/pectin methylesterase inhibitor superfamily
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Plant invertase/pectin methylesterase inhibitor superfamily; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: cell wall, chloroplast, plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT5G64640.1); Has 2807 Blast hits to 2761 proteins in 473 species: Archae - 6; Bacteria - 874; Metazoa - 1; Fungi - 174; Plants - 1725; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT5G09760-MONOMEREC:3.1.1.11eggNOG:COG4677eggNOG:ENOG410IFZX
EMBL:AB020752EMBL:AL353994EMBL:AY070093EMBL:BT006059
EMBL:CP002688EnsemblPlants:AT5G09760EnsemblPlants:AT5G09760.1entrez:830836
Gene3D:1.20.140.40Gene3D:2.160.20.10GeneID:830836Genevisible:Q9LXD9
GO:GO:0004857GO:GO:0005576GO:GO:0005618GO:GO:0030599
GO:GO:0042545GO:GO:0045330GO:GO:0045490Gramene:AT5G09760.1
gramene_pathway:3.1.1.11gramene_pathway:PWY-1081hmmpanther:PTHR31707hmmpanther:PTHR31707:SF24
HOGENOM:HOG000217409InParanoid:Q9LXD9InterPro:IPR000070InterPro:IPR006501
InterPro:IPR011050InterPro:IPR012334KEGG:00040+3.1.1.11KEGG:00500+3.1.1.11
KEGG:ath:AT5G09760OMA:TSRWAPPPaxDb:Q9LXD9Pfam:PF01095
Pfam:PF04043Pfam:Q9LXD9PhylomeDB:Q9LXD9PIR:T49922
PRIDE:Q9LXD9PRO:PR:Q9LXD9ProteinModelPortal:Q9LXD9Proteomes:UP000006548
RefSeq:NP_196538.1SMART:SM00856SMR:Q9LXD9SUPFAM:SSF101148
SUPFAM:SSF51126TAIR:AT5G09760TIGRfam:TIGR01614TIGRFAMs:TIGR01614
UniGene:At.28396UniPathway:UPA00545UniProt:Q9LXD9
Coordinates (TAIR10) chr5:+:3032446..3034364
Molecular Weight (calculated) 60442.00 Da
IEP (calculated) 6.32
GRAVY (calculated) -0.29
Length 551 amino acids
Sequence (TAIR10)
(BLAST)
001: MSSILILLFS LFLFSSPSSS SRHHHHHNSG DTSPVNPSSS LAAQIRLACN ATRYPDQCVS SLSEQGRVPP DPKPIQIIHS AISFSFQNLK TAQSKIKSIV
101: DSSVGNLNRT NAANTCLQLL TYSEHRTQST DQALTRGKIK DARAWMSAAL VYQYDSWSAL KYVNDTSQVG ETMSFLDGLI HVTSNALSMM VSYDNFGDNV
201: ASWTYPATER DGFWEKTGPG LGLDPSTGLN LGFPSGLKED VTVCKDGKCG YKTVQDAVNA APEDNGMRKF VIKISEGVYE ENVIVPFEKK NVVFIGDGMG
301: KTVITGSLNA GMPGITTYNT ATVGVVGDGF MARDLTFQNT AGPDAHQAVA FRSDSDFSLI ENCEFLGNQD TLYAHGLRQF YKNCRIQGNV DFIFGNSAAV
401: FQDCEILIAP RQINPEKGEK NAVTAQGRID PSQSTGFVFL NCLINGTEEY MKLFKANPKV HKNFLGRPWK DYSRTVFIGC NLEALITPDG WLPWSGDFAL
501: KTLYYGESKN TGPGSDRSQR VSWSSQIPDE HVHVYSVANF IQADEWASMS A
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)