AT2G30080.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.998 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : ZIP metal ion transporter family | ||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
member of Fe(II) transporter isolog family. Gene expression is not regulated by iron, copper, or zinc deficiency or excess. | ||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
ZIP6; FUNCTIONS IN: cation transmembrane transporter activity, metal ion transmembrane transporter activity; INVOLVED IN: cation transport, response to nematode; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Zinc/iron permease, fungal/plant (InterPro:IPR004698), Zinc/iron permease (InterPro:IPR003689); BEST Arabidopsis thaliana protein match is: zinc transporter 7 precursor (TAIR:AT2G04032.1); Has 1739 Blast hits to 1619 proteins in 263 species: Archae - 0; Bacteria - 69; Metazoa - 337; Fungi - 628; Plants - 518; Viruses - 0; Other Eukaryotes - 187 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:-:12838730..12840112 | ||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 36023.70 Da | ||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.03 | ||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.64 | ||||||||||||||||||||||||||||||||||||||||||||
| Length | 341 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MASCVTGTEA AIRAAACRDG EEASHLKIVA VFAIFLTSVF GVWGPVLLAK YFHGKPLYDK AILVIKCFAA GVILSTSLVH VLPEAFESLA DCQVSSRHPW 101: KDFPFAGLVT MIGAITALLV DLTASEHMGH GGGGGGDGGM EYMPVGKAVG GLEMKEGKCG ADLEIQENSE EEIVKMKQRL VSQVLEIGII FHSVIIGVTM 201: GMSQNKCTIR PLIAALSFHQ IFEGLGLGGC IAQAGFKAGT VVYMCLMFAV TTPLGIVLGM VIFAATGYDD QNPNALIMEG LLGSFSSGIL IYMALVDLIA 301: LDFFHNKMLT TCGESGSRLK KLCFVALVLG SASMSLLALW A |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)