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AT1G02720.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
endoplasmic reticulum 0.923
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : galacturonosyltransferase 5
Curator
Summary (TAIR10)
Encodes a protein with putative galacturonosyltransferase activity.
Computational
Description (TAIR10)
galacturonosyltransferase 5 (GATL5); FUNCTIONS IN: transferase activity, transferring hexosyl groups, polygalacturonate 4-alpha-galacturonosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: carbohydrate biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: galacturonosyltransferase 6 (TAIR:AT4G02130.3); Has 2014 Blast hits to 2000 proteins in 469 species: Archae - 0; Bacteria - 946; Metazoa - 269; Fungi - 2; Plants - 729; Viruses - 0; Other Eukaryotes - 68 (source: NCBI BLink).
Protein Annotations
EC:2.4.1.-eggNOG:ENOG410IEE5eggNOG:ENOG41106K3EMBL:KJ139034
EnsemblPlants:AT1G02720EnsemblPlants:AT1G02720.1EnsemblPlants:AT1G02720.2entrez:839475
ExpressionAtlas:W8Q7E9Gene3D:3.90.550.10GeneID:839475GO:GO:0016757
Gramene:AT1G02720.1Gramene:AT1G02720.2hmmpanther:PTHR13778hmmpanther:PTHR13778:SF8
InterPro:IPR002495InterPro:IPR029044KEGG:ath:AT1G02720OMA:NQNITQQ
PaxDb:W8Q7E9Pfam:PF01501Pfam:Q9FWY9PhylomeDB:W8Q7E9
PRO:PR:Q9FWY9ProteinModelPortal:W8Q7E9RefSeq:NP_171772.1RefSeq:NP_973744.1
SMR:W8Q7E9SUPFAM:SSF53448tair10-symbols:GATL5UniGene:At.23246
UniProt:Q9FWY9UniProt:W8Q7E9
Coordinates (TAIR10) chr1:+:592115..593200
Molecular Weight (calculated) 41158.20 Da
IEP (calculated) 8.84
GRAVY (calculated) -0.21
Length 361 amino acids
Sequence (TAIR10)
(BLAST)
001: MHWITRFSAF FSAALAMILL SPSLQSFSPA AAIRSSHPYA DEFKPQQNSD YSSFRESPMF RNAEQCRSSG EDSGVCNPNL VHVAITLDID YLRGSIAAVN
101: SILQHSMCPQ SVFFHFLVSS ESQNLESLIR STFPKLTNLK IYYFAPETVQ SLISSSVRQA LEQPLNYARN YLADLLEPCV KRVIYLDSDL VVVDDIVKLW
201: KTGLGQRTIG APEYCHANFT KYFTGGFWSD KRFNGTFKGR NPCYFNTGVM VIDLKKWRQF RFTKRIEKWM EIQKIERIYE LGSLPPFLLV FAGHVAPISH
301: RWNQHGLGGD NVRGSCRDLH SGPVSLLHWS GSGKPWLRLD SKLPCPLDTL WAPYDLYKHS H
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)