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AT5G07320.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
mitochondrion 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Mitochondrial substrate carrier family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Mitochondrial substrate carrier family protein; FUNCTIONS IN: binding, calcium ion binding; INVOLVED IN: transport, transmembrane transport; LOCATED IN: mitochondrial inner membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), Mitochondrial substrate carrier (InterPro:IPR001993), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), Mitochondrial carrier protein (InterPro:IPR002067), EF-HAND 2 (InterPro:IPR018249), Mitochondrial substrate/solute carrier (InterPro:IPR018108); BEST Arabidopsis thaliana protein match is: Mitochondrial substrate carrier family protein (TAIR:AT5G61810.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410XQ4PeggNOG:KOG0036EMBL:AK175228EMBL:AL163912
EMBL:CP002688EnsemblPlants:AT5G07320EnsemblPlants:AT5G07320.1entrez:830623
Gene3D:1.10.238.10Gene3D:1.50.40.10GeneID:830623GO:GO:0003735
GO:GO:0005347GO:GO:0005509GO:GO:0005739GO:GO:0006412
GO:GO:0015114GO:GO:0015217GO:GO:0015866GO:GO:0015867
GO:GO:0016021GO:GO:0035435GO:GO:0080121GO:GO:0080122
Gramene:AT5G07320.1hmmpanther:PTHR24089hmmpanther:PTHR24089:SF294HOGENOM:HOG000165728
InterPro:IPR002048InterPro:IPR002067InterPro:IPR011992InterPro:IPR018108
InterPro:IPR018247InterPro:IPR023395KEGG:ath:AT5G07320KO:K14684
OMA:ERISKHAPfam:PF00153Pfam:PF13202Pfam:PF13499
Pfscan:PS50222Pfscan:PS50920PhylomeDB:Q9LY28PIR:T49871
PRINTS:PR00926PROSITE:PS00018PROSITE:PS50222PROSITE:PS50920
Proteomes:UP000006548RefSeq:NP_196349.1scanprosite:PS00018SMART:SM00054
SMR:Q9LY28STRING:3702.AT5G07320.1SUPFAM:0048588SUPFAM:SSF103506
SUPFAM:SSF47473TAIR:AT5G07320UniGene:At.51053UniProt:Q9LY28
Coordinates (TAIR10) chr5:+:2310248..2312082
Molecular Weight (calculated) 53972.70 Da
IEP (calculated) 7.19
GRAVY (calculated) -0.18
Length 479 amino acids
Sequence (TAIR10)
(BLAST)
001: MESSKPKNRN PMKKPVSITM EHVLLALRET MDEREIRIRS LFDFFDNSNL GFLDYAQIEK GLASLQIPPE YKYARDLFRV CDANRDGRVD YQEFRRYIDA
101: KELELYRIFQ AIDVEHNGCI LPEELWEALV KAGIEIDDEE LARFVEHVDK DNNGTITFEE WRDFLLLYPH EATLENIYHH WERVCLIDIG EQAVIPDGIS
201: KHVKRSRLLL AGGLAGAVSR TATAPLDRLK VVLQVQRAHA GVLPTIKKIW REDKLMGFFR GNGLNVMKVA PESAIKFCAY EMLKPMIGGE DGDIGTSGRL
301: MAGGMAGALA QTAIYPMDLV KTRLQTCVSE GGKAPKLWKL TKDIWVREGP RAFYKGLFPS LLGIVPYAGI DLAAYETLKD LSRTYILQDT EPGPLIQLSC
401: GMTSGALGAS CVYPLQVVRT RMQADSSKTT MKQEFMNTMK GEGLRGFYRG LLPNLLKVVP AASITYIVYE AMKKNMALD
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)