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AT1G14590.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plastid 0.800
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Nucleotide-diphospho-sugar transferase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Nucleotide-diphospho-sugar transferase family protein; CONTAINS InterPro DOMAIN/s: Nucleotide-diphospho-sugar transferase, predicted (InterPro:IPR005069); BEST Arabidopsis thaliana protein match is: Nucleotide-diphospho-sugar transferase family protein (TAIR:AT2G02061.1); Has 314 Blast hits to 308 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 294; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink).
Protein Annotations
CAZy:GT77eggNOG:ENOG410IGNSeggNOG:ENOG410YD0FEMBL:AC010657
EMBL:CP002684EMBL:KJ139006EnsemblPlants:AT1G14590EnsemblPlants:AT1G14590.1
entrez:838021GeneID:838021GO:GO:0016740Gramene:AT1G14590.1
hmmpanther:PTHR24015hmmpanther:PTHR24015:SF419HOGENOM:HOG000238616InterPro:IPR005069
KEGG:ath:AT1G14590OMA:LRVIMEDPfam:PF03407PhylomeDB:Q9MA24
PIR:E86280Proteomes:UP000006548RefSeq:NP_172911.1TAIR:AT1G14590
UniGene:At.41963UniProt:Q9MA24
Coordinates (TAIR10) chr1:-:4998957..5000617
Molecular Weight (calculated) 44416.80 Da
IEP (calculated) 6.29
GRAVY (calculated) -0.24
Length 386 amino acids
Sequence (TAIR10)
(BLAST)
001: MNLSHRVGSR FHTASLEASS SANNPFAEGS GEMSPGPSIP LRRAALFLAA ISISCFVLYR AADSLSFSPP IFDLSSYLDN EEPKLEDVLS KAATRDRTVV
101: LTTLNAAWAA PGSVIDLFFE SFRIGEETSQ ILDHLVIVAL DAKAYSRCLE LHKHCFSLVT EGVDFSREAY FMTRSYLKMM WRRIDLLRSV LEMGYNFVFT
201: DADVMWFRNP FPRFYMYADF QIACDHYLGR SNDLHNRPNG GFNFVRSNNR TILFYKYWYA SRLRFPGYHD QDVLNFLKAE PFVFRIGLKM RFLNTAYFGG
301: LCEPSRDLNL VRTMHANCCY GMESKLHDLR IMLQDWKDFM SLPLHLKQSS GFSWKVPQNC SLDSLRRYDE SVEDDEESDP PGESQD
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)