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AT5G06570.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
cytosol 0.852
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : alpha/beta-Hydrolases superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-3 (InterPro:IPR013094); BEST Arabidopsis thaliana protein match is: carboxyesterase 17 (TAIR:AT5G16080.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT5G06570-MONOMERBioCyc:ARA:GQT-431-MONOMERBioGrid:15824EC:3.1.1.1
eggNOG:COG0657eggNOG:KOG1515EMBL:AK118580EMBL:AP002543
EMBL:BT008350EMBL:CP002688EnsemblPlants:AT5G06570EnsemblPlants:AT5G06570.1
EnsemblPlants:AT5G06570.2entrez:830545ESTHER:arath-CXE15Gene3D:3.40.50.1820
GeneID:830545Genevisible:Q9FG13GO:GO:0052689Gramene:AT5G06570.1
Gramene:AT5G06570.2hmmpanther:PTHR23024hmmpanther:PTHR23024:SF102HOGENOM:HOG000152323
InParanoid:Q9FG13IntAct:Q9FG13InterPro:IPR013094InterPro:IPR029058
KEGG:ath:AT5G06570OMA:FKDSIYHPaxDb:Q9FG13Pfam:PF07859
Pfam:Q9FG13PhylomeDB:Q9FG13PRIDE:Q9FG13PRO:PR:Q9FG13
ProteinModelPortal:Q9FG13Proteomes:UP000006548RefSeq:NP_196275.1RefSeq:NP_850782.1
SMR:Q9FG13STRING:3702.AT5G06570.1SUPFAM:SSF53474TAIR:AT5G06570
UniGene:At.43832UniProt:Q9FG13
Coordinates (TAIR10) chr5:-:2008075..2011013
Molecular Weight (calculated) 36599.40 Da
IEP (calculated) 5.36
GRAVY (calculated) -0.20
Length 329 amino acids
Sequence (TAIR10)
(BLAST)
001: MGSLGEEPQV AEDCMGLLQL LSNGTVLRSE SIDLITQQIP FKNNQTVLFK DSIYHKPNNL HLRLYKPISA SNRTALPVVV FFHGGGFCFG SRSWPHFHNF
101: CLTLASSLNA LVVSPDYRLA PEHRLPAAFE DAEAVLTWLW DQAVSDGVNH WFEDGTDVDF DRVFVVGDSS GGNIAHQLAV RFGSGSIELT PVRVRGYVLM
201: GPFFGGEERT NSENGPSEAL LSLDLLDKFW RLSLPNGATR DHHMANPFGP TSPTLESISL EPMLVIVGGS ELLRDRAKEY AYKLKKMGGK RVDYIEFENK
301: EHGFYSNYPS SEAAEQVLRI IGDFMNNLS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)