suba logo
AT1G52695.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

.
SUBAcon:
plasma membrane 0.608
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data
Description (TAIR10) protein_coding : alpha/beta-Hydrolases superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity, hydrolase activity, acting on ester bonds; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Phospholipase/carboxylesterase (InterPro:IPR003140); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G52700.1); Has 1130 Blast hits to 1124 proteins in 378 species: Archae - 0; Bacteria - 417; Metazoa - 323; Fungi - 98; Plants - 169; Viruses - 0; Other Eukaryotes - 123 (source: NCBI BLink).
Protein Annotations
eggNOG:COG0400eggNOG:KOG2112EMBL:AK117929EMBL:BT005250
EMBL:CP002684EnsemblPlants:AT1G52695EnsemblPlants:AT1G52695.1entrez:841702
ESTHER:arath-AT1G52695Gene3D:3.40.50.1820GeneID:841702GO:GO:0016787
Gramene:AT1G52695.1hmmpanther:PTHR10655hmmpanther:PTHR10655:SF32HOGENOM:HOG000260139
IntAct:Q8GY12InterPro:IPR003140InterPro:IPR029058KEGG:ath:AT1G52695
OMA:GYRCADSPfam:PF02230PhylomeDB:Q8GY12Proteomes:UP000006548
RefSeq:NP_849799.1SMR:Q8GY12STRING:3702.AT1G52695.1SUPFAM:SSF53474
TAIR:AT1G52695UniGene:At.47273UniProt:Q8GY12
Coordinates (TAIR10) chr1:-:19621411..19623388
Molecular Weight (calculated) 25330.30 Da
IEP (calculated) 7.40
GRAVY (calculated) -0.01
Length 231 amino acids
Sequence (TAIR10)
(BLAST)
001: MASGSINVSG LEFGQINTVY PTGIHKATIV WLHDVGNTGF NSLEPLQNLR LPNIKWICPT APRRRVTSLG GEITNAWCDI AKVSENMQDD FGTLNYVNEY
101: ITSLFSNEPQ NVIKGVAGLG LGAAQALYYT SCYAFGWVPI NPQIVIGING WLPGWRRLEY NMNNTNFGTA NRAAASKILI LHGTSDDVVP SSFGYRCADS
201: LRMAGFPTLF KQCGGDHVIN EIRVWLTNLG L
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)