AT5G03640.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 0.966 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Protein kinase superfamily protein | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Protein kinase superfamily protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: stem, inflorescence meristem, male gametophyte; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: KCBP-interacting protein kinase (TAIR:AT3G52890.2); Has 112398 Blast hits to 81665 proteins in 2581 species: Archae - 38; Bacteria - 14383; Metazoa - 44343; Fungi - 13232; Plants - 18600; Viruses - 335; Other Eukaryotes - 21467 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:+:927915..930781 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 102167.00 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 7.57 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.51 | ||||||||||||||||||||||||||||||||||||||||
| Length | 926 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MGSFAGKCEI VEEKEDRQNS IGYSAKSTTI PHSRSSIVDD KDLERPVLKL GYRGSLEDDI NQLFESISIR TSGMIPSYQV GATSSSRNNT PLQRNALKSP 101: ANPAGPRSPS KRNAEPATLK QALRDLCVTK ASETAATKRI PKSTSTGGSV YGSVLVEPGS GASEEGKAVL VELLGEDQSS SSDSISQQLR LLKIHSSSQN 201: SQTSKRYCDE MTILKKHKNL SLDDQEMSIE NKNFGSSSPG SGNNKTVVGL KSVRKVRLLY ANTPSSTIVN GKRVAKLTRT IPRGGGAKPA LRNKGSMKKK 301: ATNVYDEVDG FYDPIAKELL CHRCHFSLKN TAAKEDPSKD SLVEPHEICA KDELASDFSS SSYESSHEIS ASAETKLDKI RSSLDLMNSE TSHVSLTSAF 401: RNKNIKDVSE YGNNEIMEED SLSGKEVDQK DSVFMSEQSV EIGSFSEKSV VMNPDSPPNK LSLGGAAIED VNENSEIINK GDGYNSSTTS ISEEEVQQQS 501: NNIMTRSSFG NRPHMSKDVR WEAIQHIRAQ HGLGSLGLRH FNLLKKLGCG DIGTVYLAEL TGTNCLFAIK VMDNEFLERR NKMSRAQTEK DILKMLDHPF 601: LPTLYAHFTS DNLSCLVMEC CPGGDLHVLR QKQPGRWFPE PAARFYVAEV LLALEYLHML GVIYRDLKPE NILVRDDGHI MVTDFDLSLR CTVSPTLLNS 701: SSPLHADAMR LSSGSRTGSN CIEPSCFRPK LSRGSGPKKK GKQHRMMMKK LKKSDLIARF KSLPQLVAEP TDARSNSFVG THEYLAPEII KGEGHGAAVD 801: WWTFGIFLYE LLYGKTPFKG ATNEETIANV VLQSLKFPDN PNVSFQAKDL IRGLLVKEPE NRLGTEKGAA EIKRHAFFEG LNWALIRCAI PPELPDFYDY 901: GVPNQEGKSN YLDCKAVGEH LEFELF |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)