suba logo
AT1G34510.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

.
SUBAcon:
extracellular 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Peroxidase superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: oxidation reduction, response to oxidative stress; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidase, active site (InterPro:IPR019794), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT4G26010.1); Has 4240 Blast hits to 4214 proteins in 248 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 107; Plants - 4078; Viruses - 0; Other Eukaryotes - 54 (source: NCBI BLink).
Protein Annotations
EC:1.11.1.7eggNOG:ENOG410IV8UeggNOG:ENOG4110UVGEMBL:AC023279
EMBL:AK228167EnsemblPlants:AT1G34510EnsemblPlants:AT1G34510.1entrez:840353
ExpressionAtlas:Q0WRX6GeneID:840353GO:GO:0004601GO:GO:0005576
GO:GO:0006979GO:GO:0020037GO:GO:0042744GO:GO:0046872
Gramene:AT1G34510.1hmmpanther:PTHR31235hmmpanther:PTHR31235:SF13InterPro:IPR000823
InterPro:IPR002016InterPro:IPR010255InterPro:IPR019794KEGG:00940+1.11.1.7
KEGG:ath:AT1G34510KO:K00430PaxDb:Q0WRX6PeroxiBase:84
Pfam:PF00141Pfam:Q9LNL0Pfscan:PS50873PhylomeDB:Q0WRX6
PRIDE:Q0WRX6PRINTS:PR00458PRINTS:PR00461PROSITE:PS00436
PROSITE:PS50873ProteinModelPortal:Q0WRX6Proteomes:UP000006548RefSeq:NP_174710.1
scanprosite:PS00436SMR:Q0WRX6SMR:Q9LNL0STRING:3702.AT1G34510.1
SUPFAM:SSF48113TAIR:AT1G34510UniGene:At.39717UniProt:Q0WRX6
UniProt:Q9LNL0
Coordinates (TAIR10) chr1:-:12615928..12616952
Molecular Weight (calculated) 34333.50 Da
IEP (calculated) 9.54
GRAVY (calculated) -0.18
Length 310 amino acids
Sequence (TAIR10)
(BLAST)
001: MRAIAAWFFI FCYLVPSVFA QLRHGFYEGT CPPAESIVGR VVFNHWDRNR TVTAALLRMQ FHDCVVKGCD ASLLIDPTTE RPSEKSVGRN AGVRGFEIID
101: EAKKELELVC PKTVSCADIV TIATRDSIAL AGGPKFKVRT GRRDGLRSNP SDVKLLGPTV SVATSIKAFK SIGFNVSTMV ALIGGGHTVG VAHCSLFQDR
201: IKDPKMDSKL RAKLKKSCRG PNDPSVFMDQ NTPFRVDNEI YRQMIQQRAI LRIDDNLIRD GSTRSIVSDF AYNNKLFKES FAEAMQKMGE IGVLTGDSGE
301: IRTNCRAFNN
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)