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AT5G03470.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 0.927
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Protein phosphatase 2A regulatory B subunit family protein
Curator
Summary (TAIR10)
Encodes B' regulatory subunit of PP2A (AtB'alpha), putative size of 57 kDa.
Computational
Description (TAIR10)
ATB' ALPHA; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2A, regulatory B subunit, B56 (InterPro:IPR002554); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2A regulatory B subunit family protein (TAIR:AT3G09880.1); Has 1194 Blast hits to 1162 proteins in 195 species: Archae - 0; Bacteria - 0; Metazoa - 571; Fungi - 171; Plants - 302; Viruses - 0; Other Eukaryotes - 150 (source: NCBI BLink).
Protein Annotations
BioGrid:17104eggNOG:ENOG410XQJWeggNOG:KOG2085EMBL:AL162751
EMBL:BT002933EMBL:CP002688EMBL:U73526EnsemblPlants:AT5G03470
EnsemblPlants:AT5G03470.1entrez:831828GeneID:831828Genevisible:O04375
GO:GO:0000159GO:GO:0007165GO:GO:0008601GO:GO:0034047
GO:GO:0042325Gramene:AT5G03470.1hmmpanther:PTHR10257hmmpanther:PTHR10257:SF20
HOGENOM:HOG000067326InterPro:IPR002554InterPro:IPR016024KEGG:ath:AT5G03470
KO:K11584ncoils:CoilOMA:KPIAMYHPANTHER:PTHR10257
PaxDb:O04375Pfam:O04375Pfam:PF01603PhylomeDB:O04375
PIR:T48372PIRSF:PIRSF028043PRIDE:O04375PRO:PR:O04375
ProteinModelPortal:O04375Proteomes:UP000006548Reactome:R-ATH-198753Reactome:R-ATH-202670
RefSeq:NP_195967.1SMR:O04375STRING:3702.AT5G03470.1SUPFAM:SSF48371
TAIR:AT5G03470tair10-symbols:ATB' ALPHAUniGene:At.19971UniProt:O04375
Coordinates (TAIR10) chr5:+:866795..868872
Molecular Weight (calculated) 57539.60 Da
IEP (calculated) 6.52
GRAVY (calculated) -0.35
Length 495 amino acids
Sequence (TAIR10)
(BLAST)
001: MFKKIMKGAN RKASKAEAND SSMYGFDPPG RSGPGSNMIV NHASRGSLVP SSPNSMAAAT TQPPPMYSVE PLPLFRDVSV SERQSLFLRK LQICCFQFDF
101: TDTLKNAREK EIKRQTLLEL VDFIQSGAGK LTEVCQEEMV KMISVNIFRC LPPASHENTG QEPADLEEEE PYLEPSWPHL QLIYELLLRY IVPSDTDTKV
201: AKRYIDHSFV LRLLELFETE DPREREYLKT ILHRIYGKFM VHRPFIRKAM NHIFYRFIYE TERHSGIGEL LEILGSIING FALPMKEEHK LFLIRALIPL
301: HKPKPIAMYH QQLSYCIVQF VEKDYKLADT VIRGLLKFWP VTNCTKEVLF LGELEEVLEA TQTVEFQRCM VPLFQQIARC LSSSNFQVAE RALFLWNNEH
401: VVGLIAQNRG VILPIIFASL EKNIESHWNQ AVHGLSANIK RMFMEMDPEL FEECQQQYEE KQAKSKQVEE QRQNRWRRLD EAVEERERED PMITS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)