suba logo
AT4G37810.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

.
SUBAcon:
extracellular 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G10310.1); Has 149 Blast hits to 149 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 149; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410J3VWeggNOG:ENOG410YZE3EMBL:AL035709EMBL:AL161592
EMBL:CP002687EnsemblPlants:AT4G37810EnsemblPlants:AT4G37810.1entrez:829937
GeneID:829937GO:GO:0005576GO:GO:0010052GO:GO:0010374
Gramene:AT4G37810.1hmmpanther:PTHR33109hmmpanther:PTHR33109:SF7HOGENOM:HOG000239501
InParanoid:Q9T068KEGG:ath:AT4G37810OMA:HFSLMANPaxDb:Q9T068
Pfam:Q9T068PhylomeDB:Q9T068PIR:T06028PRIDE:Q9T068
PRO:PR:Q9T068Proteomes:UP000006548RefSeq:NP_680774.1STRING:3702.AT4G37810.1
TAIR:AT4G37810UniGene:At.45312UniProt:Q9T068
Coordinates (TAIR10) chr4:+:17780970..17781544
Molecular Weight (calculated) 14319.10 Da
IEP (calculated) 8.38
GRAVY (calculated) -0.50
Length 128 amino acids
Sequence (TAIR10)
(BLAST)
001: MVWSSNMSSF LLILLILNST HFSLMANGRP EPDSVEFTKS GDQDVKMMMR GLIGSRPPRC ERVRCRSCGH CEAIQVPTNP QTKLHSPLTT SSSSSSETIH
101: LDYTRGDDST NYKPMSWKCK CGNSIYNP
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)