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AT4G36940.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
cytosol 0.985
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : nicotinate phosphoribosyltransferase 1
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
nicotinate phosphoribosyltransferase 1 (NAPRT1); FUNCTIONS IN: nicotinate phosphoribosyltransferase activity; INVOLVED IN: pyridine nucleotide biosynthetic process, nicotinate nucleotide salvage; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nicotinate phosphoribosyltransferase-related (InterPro:IPR007229), Nicotinate phosphoribosyltransferase putative (InterPro:IPR006405), Nicotinate phosphoribosyltransferase-like (InterPro:IPR015977); BEST Arabidopsis thaliana protein match is: nicotinate phosphoribosyltransferase 2 (TAIR:AT2G23420.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT4G36940-MONOMEREC:6.3.4.21eggNOG:COG1488eggNOG:KOG2511
EMBL:AL161590EMBL:AY093004EMBL:CP002687EMBL:Z99707
EnsemblPlants:AT4G36940EnsemblPlants:AT4G36940.1entrez:829848GeneID:829848
Genevisible:Q8RWM2GO:GO:0004514GO:GO:0004516GO:GO:0009435
GO:GO:0016874GO:GO:0019358Gramene:AT4G36940.1gramene_pathway:2.4.2.11
gramene_pathway:PWY-5381hmmpanther:PTHR11098hmmpanther:PTHR11098:SF17HOGENOM:HOG000001111
InterPro:IPR002638InterPro:IPR006405InterPro:IPR007229KEGG:00760+6.3.4.21
KEGG:ath:AT4G36940KO:K00763OMA:HSYVEAFPANTHER:PTHR11098
PaxDb:Q8RWM2Pfam:PF04095Pfam:Q8RWM2PhylomeDB:Q8RWM2
PIR:C85436PIRSF:PIRSF000484PRIDE:Q8RWM2PRO:PR:Q8RWM2
ProteinModelPortal:Q8RWM2Proteomes:UP000006548Reactome:R-ATH-197264RefSeq:NP_195412.3
SMR:Q8RWM2STRING:3702.AT4G36940.1SUPFAM:SSF51690SUPFAM:SSF54675
TAIR:AT4G36940tair10-symbols:NAPRT1TIGRfam:TIGR01513TIGRFAMs:TIGR01513
UniGene:At.31285UniGene:At.47988UniPathway:UPA00253UniProt:Q8RWM2
Coordinates (TAIR10) chr4:+:17416938..17419883
Molecular Weight (calculated) 62424.00 Da
IEP (calculated) 6.15
GRAVY (calculated) -0.14
Length 559 amino acids
Sequence (TAIR10)
(BLAST)
001: MEKKENGLDG KQSGRVINGP TNPMVTPLLN DLYQFTMAYA YWKAGKQSER SVFDLYFRKN PFGGEYTIFA GLEECIKFLA NFNLTDEEID FVRDSLPGCE
101: EAFCDYLRGL DCSDIEVYAI SEGSVVFPKV PLLRIEGPVA VVQLLETPFL NLINYASLVA TNAARHRFVA GKSKLLLEFG ARRAQGPDGA ISASKYCYLG
201: GFDATSNVAA GKLFGIPLRG THSHAFVSSF MSLDEIVDKV LRSSDGKSTC KDFICLVQTC LTKIQNSSSL QGIFSETNQS ELAAFISYAL AFPNSFLALV
301: DTYDVMKSGI PNFCAVALAL NELGYKAVGI RLDSGDLAYL STEVRKFFCA IERDLKVPDF GKMIVTASND LNEETVDALN KQGHEVDAFG IGTNLVTCYA
401: QAALGCVFKL VEINNQPRIK LSEDVTKVSI PCKKRTYRLF GKEGYPLVDI MTGENEPPPK VGERLLCRHP FNESKRAYVV PQRVEELLKC YWRGNADEAR
501: EELEPLKELR NRCIKQLENM RPDHMRRLNP TPYKVSVSAK LYDFIHFLWL NEAPVGELH
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)