AT4G35030.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 0.463 plasma membrane 0.415 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Protein kinase superfamily protein | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase protein with adenine nucleotide alpha hydrolases-like domain (TAIR:AT2G16750.1); Has 46975 Blast hits to 46495 proteins in 1494 species: Archae - 58; Bacteria - 2801; Metazoa - 13320; Fungi - 2015; Plants - 23583; Viruses - 130; Other Eukaryotes - 5068 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:+:16676234..16677423 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 37223.20 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 8.89 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.29 | ||||||||||||||||||||||||||||||||||||
| Length | 321 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MGEEKRRISG RSVSLPSIDI LLDEKPGWPF LKRASLGTPQ QVHKWHTRKV SVVNWVMSLP ERFPNHQQTL NYETSLIKKQ IKDILRDNNK WFNYNVLRKA 101: TSDFSQENVI GKGGCNEVYR GILEDGKGIA VKILKSSSKE AMTNFVHEIN IISSLSHQNI SPLLGVCVQD NELISVYNLS NTGSLEETLH GKQKGKYVLS 201: WEERFKIAIG LAEALDYLHN RCSKPVIHRD VKTSNVLLSL ELQPQVICQI LVCRCGDRQH LLDIRYKVMW WEHLDILHRS TSCMEKSVIK LMFTPLEWFC 301: LNSFLEEILF HLRILEDKRV W |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)