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AT4G35000.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
peroxisome 1.000
ASURE: peroxisome
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31975158 (2020): plastid
  • PMID:31932409 (2020): plastid
  • PMID:31871212 (2020): mitochondrion
  • PMID:31818904 (2020): mitochondrion
  • PMID:31615849 (2019): plastid plastid thylakoid
  • PMID:31520498 (2020): mitochondrion
  • PMID:31023727 (2019): mitochondrion
  • PMID:30962257 (2019): plastid
  • PMID:30961429 (2019): nucleus
  • PMID:30135097 (2018): plastid
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:27943495 (2017): mitochondrion
  • PMID:27137770 (2016): plastid plastid stroma
  • PMID:25900983 (2015): Golgi
  • PMID:25900983 (2015): plant-type vacuole plant-type vacuole membrane
  • PMID:25900983 (2015): Golgi Golgi apparatus Golgi membrane
  • PMID:25900983 (2015): Golgi trans-Golgi network
  • PMID:25900983 (2015): Golgi trans-Golgi network early endosome
  • PMID:25900983 (2015): Golgi trans-Golgi network multivesicular body
  • PMID:25641898 (2015): plasma membrane
  • PMID:24872594 (2014): plastid
  • PMID:24130194 (2013): peroxisome
  • PMID:24124904 (2013): plastid
  • PMID:23750852 (2013): mitochondrion
  • PMID:23673981 (2013): plastid plastid stroma plastoglobules
  • PMID:22923678 (2012): plastid
  • PMID:22550958 (2012): plastid
  • PMID:21988472 (2012): plant-type vacuole plant-type vacuole membrane
  • PMID:21896887 (2011): mitochondrion mitochondrial envelope mitochondrial outer membrane
  • PMID:21472856 (2011): mitochondrion
  • PMID:21311031 (2011): mitochondrion
  • PMID:20061580 (2010): plastid plastid envelope
  • PMID:19334764 (2009): plasma membrane
  • PMID:19329564 (2009): peroxisome
  • PMID:18931141 (2008): peroxisome
  • PMID:17951448 (2007): peroxisome
  • PMID:17151019 (2007): plant-type vacuole
  • PMID:16618929 (2006): unclear
  • PMID:15276431 (2004): mitochondrion
  • PMID:14760709 (2004): plant-type vacuole
  • PMID:14581625 (2003): peroxisome
  • PMID:12938931 (2003): plastid
  • PMID:12766230 (2003): plastid
  • PMID:12154131 (2002): peroxisome
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : ascorbate peroxidase 3
Curator
Summary (TAIR10)
Encodes a microsomal ascorbate peroxidase APX3. Ascorbate peroxidases are enzymes that scavenge hydrogen peroxide in plant cells. Eight types of APX have been described for Arabidopsis: three cytosolic (APX1, APX2, APX6), two chloroplastic types (stromal sAPX, thylakoid tAPX), and three microsomal (APX3, APX4, APX5) isoforms. The APX3 protein interacts with AKR2 (ankyrin-containing protein that interacts with AFT1) and AFT1, a 14-3-3 protein.
Computational
Description (TAIR10)
ascorbate peroxidase 3 (APX3); FUNCTIONS IN: L-ascorbate peroxidase activity; INVOLVED IN: response to oxidative stress; LOCATED IN: in 7 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant ascorbate peroxidase (InterPro:IPR002207), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: ascorbate peroxidase 5 (TAIR:AT4G35970.1); Has 9863 Blast hits to 8656 proteins in 1251 species: Archae - 86; Bacteria - 3261; Metazoa - 20; Fungi - 794; Plants - 3685; Viruses - 0; Other Eukaryotes - 2017 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT4G35000-MONOMERBioGrid:14934EC:1.11.1.11eggNOG:COG0376
eggNOG:ENOG410IF5TEMBL:AJ006030EMBL:AL022023EMBL:AL161586
EMBL:AY065143EMBL:AY081646EMBL:AY086162EMBL:CP002687
EMBL:U69138EMBL:X98003EMBL:X98276EnsemblPlants:AT4G35000
EnsemblPlants:AT4G35000.1entrez:829652GeneID:829652Genevisible:Q42564
GO:GO:0005739GO:GO:0005773GO:GO:0005774GO:GO:0005777
GO:GO:0005778GO:GO:0006979GO:GO:0009506GO:GO:0009507
GO:GO:0009514GO:GO:0009536GO:GO:0009735GO:GO:0009941
GO:GO:0016021GO:GO:0016688GO:GO:0020037GO:GO:0042744
GO:GO:0046861GO:GO:0046872GO:GO:0098869Gramene:AT4G35000.1
gramene_pathway:1.11.1.11gramene_pathway:PWY-2261hmmpanther:PTHR31356hmmpanther:PTHR31356:SF9
HOGENOM:HOG000189824InParanoid:Q42564InterPro:IPR002016InterPro:IPR002207
InterPro:IPR010255InterPro:IPR019793InterPro:IPR019794KEGG:ath:AT4G35000
KO:K00434OMA:KNPKITYPaxDb:Q42564PeroxiBase:1891
Pfam:PF00141Pfam:Q42564Pfscan:PS50873PhylomeDB:Q42564
PIR:S71279PRIDE:Q42564PRINTS:PR00458PRINTS:PR00459
PRO:PR:Q42564PROSITE:PS00435PROSITE:PS00436PROSITE:PS50873
ProteinModelPortal:Q42564Proteomes:UP000006548RefSeq:NP_195226.1scanprosite:PS00435
scanprosite:PS00436SMR:Q42564STRING:3702.AT4G35000.1SUPFAM:SSF48113
TAIR:AT4G35000tair10-symbols:APX3TMHMM:TMhelixUniGene:At.47586
UniProt:Q42564
Coordinates (TAIR10) chr4:-:16665007..16667541
Molecular Weight (calculated) 31573.60 Da
IEP (calculated) 6.96
GRAVY (calculated) -0.37
Length 287 amino acids
Sequence (TAIR10)
(BLAST)
001: MAAPIVDAEY LKEITKARRE LRSLIANKNC APIMLRLAWH DAGTYDAQSK TGGPNGSIRN EEEHTHGANS GLKIALDLCE GVKAKHPKIT YADLYQLAGV
101: VAVEVTGGPD IVFVPGRKDS NVCPKEGRLP DAKQGFQHLR DVFYRMGLSD KDIVALSGGH TLGRAHPERS GFDGPWTQEP LKFDNSYFVE LLKGESEGLL
201: KLPTDKTLLE DPEFRRLVEL YAKDEDAFFR DYAESHKKLS ELGFNPNSSA GKAVADSTIL AQSAFGVAVA AAVVAFGYFY EIRKRMK
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)