AT3G52880.1
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:peroxisome 1.000 ASURE: peroxisome What is SUBAcon? |
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Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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Description (TAIR10) | protein_coding : monodehydroascorbate reductase 1 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Curator Summary (TAIR10) |
Encodes a peroxisomal monodehydroascorbate reductase, involved in the ascorbate-glutathione cycle which removes toxic H2O2 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Computational Description (TAIR10) |
monodehydroascorbate reductase 1 (MDAR1); FUNCTIONS IN: monodehydroascorbate reductase (NADH) activity; INVOLVED IN: response to cadmium ion, peptidyl-cysteine S-nitrosylation, hydrogen peroxide catabolic process; LOCATED IN: peroxisomal matrix, apoplast, chloroplast, peroxisome, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), FAD/NAD-linked reductase, dimerisation (InterPro:IPR016156), Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region (InterPro:IPR001327); BEST Arabidopsis thaliana protein match is: Pyridine nucleotide-disulphide oxidoreductase family protein (TAIR:AT5G03630.1); Has 31553 Blast hits to 31492 proteins in 3048 species: Archae - 709; Bacteria - 24685; Metazoa - 865; Fungi - 647; Plants - 730; Viruses - 0; Other Eukaryotes - 3917 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Protein Annotations |
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Coordinates (TAIR10) | chr3:-:19601477..19604366 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Molecular Weight (calculated) | 46489.70 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
IEP (calculated) | 6.80 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
GRAVY (calculated) | -0.06 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Length | 434 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
001: MAEKSFKYII LGGGVSAGYA AKEFANQGVQ PGELAVISKE AVAPYERPAL SKGYLFPEGA ARLPGFHCCV GSGGEKLLPE SYKQKGIELI LSTEIVKADL 101: SAKSLVSATG DVFKYQTLII ATGSTVLRLT DFGVKGADSK NILYLREIDD ADKLVEAIKA KKGGKAVVVG GGYIGLELSA VLRINNLDVT MVFPEPWCMP 201: RLFTADIAAF YETYYTNKGV KIIKGTVASG FTAQPNGEVK EVQLKDGRTL EADIVIVGVG AKPLTSLFKG QVEEDKGGIK TDAFFKTSVP DVYAVGDVAT 301: FPLKMYGDVR RVEHVDHSRK SAEQAVKAIK AAEGGAAVEE YDYLPFFYSR SFDLSWQFYG DNVGDSVLFG DSNPSNPKPR FGAYWVQGGK VVGAFMEGGS 401: GDENKALAKV AKARPSAESL DELVKQGISF AAKI |
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See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)