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AT4G32510.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.795
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : HCO3- transporter family
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
HCO3- transporter family; FUNCTIONS IN: anion exchanger activity; INVOLVED IN: anion transport; LOCATED IN: integral to membrane, membrane; CONTAINS InterPro DOMAIN/s: Bicarbonate transporter, C-terminal (InterPro:IPR011531), Bicarbonate transporter, eukaryotic (InterPro:IPR003020); BEST Arabidopsis thaliana protein match is: HCO3- transporter family (TAIR:AT5G25430.1); Has 2374 Blast hits to 1394 proteins in 189 species: Archae - 0; Bacteria - 4; Metazoa - 1794; Fungi - 254; Plants - 226; Viruses - 1; Other Eukaryotes - 95 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410XPHDeggNOG:KOG1172EMBL:AL034567EMBL:AL161581
EMBL:CP002687EMBL:GU971378EnsemblPlants:AT4G32510EnsemblPlants:AT4G32510.1
entrez:829386GeneID:829386GO:GO:0005452GO:GO:0016021
Gramene:AT4G32510.1hmmpanther:PTHR11453hmmpanther:PTHR11453:SF39HOGENOM:HOG000015213
InParanoid:Q9SUU1InterPro:IPR003020InterPro:IPR011531KEGG:ath:AT4G32510
OMA:FQWRYTNPANTHER:PTHR11453PaxDb:Q9SUU1Pfam:PF00955
Pfam:Q9SUU1PhylomeDB:Q9SUU1PIR:T05361PRIDE:Q9SUU1
PRO:PR:Q9SUU1ProteinModelPortal:Q9SUU1Proteomes:UP000006548Reactome:R-ATH-1237044
Reactome:R-ATH-1247673Reactome:R-ATH-425381RefSeq:NP_194977.6SMR:Q9SUU1
STRING:3702.AT4G32510.1TAIR:AT4G32510TMHMM:TMhelixUniGene:At.54580
UniProt:Q9SUU1
Coordinates (TAIR10) chr4:-:15685903..15688811
Molecular Weight (calculated) 76286.80 Da
IEP (calculated) 8.34
GRAVY (calculated) 0.19
Length 673 amino acids
Sequence (TAIR10)
(BLAST)
001: MEGVKFPFGG IINDFNGRRK CYKQDWLAAF NSGVRILAPT LYIFIASALP VIAFGEQLSR ETDRSLGIAE SLASTALCGI IHSVFGGQPL LIVGVAEPTI
101: IMYTYLHSFS KSRPELGQKL YLAWAGWVCV WTAVLLMLLA MLNACNIISR FTRIAGELFG MLITVLFIQE AVKGLIGEFL VPKSDDPSLE VYQFQWRYTN
201: GLLAVIFSFG LLYTALKSRR ARSWKYGFRW MRGFIGDYGT LLMLVLWSAF SYTVPRNLPE GVPRRLELPL PWASESLYHW TVVKDMAKVP PLYILAAFIP
301: AIMIAGLYFF DHCVSAQMAQ QKEFNLKNPT AYHYDIFILG IMTLICGLLG LPPSNGVIPQ SPMHTKSLAV LKKQQMRKKM VQKAKECMRE KASNSEIYGR
401: MQDVFIEMET SPKATSVVKE LENLKEAVMK ADDGGGETKG KKFDPEVHIE DHLPVRVNEQ RVSNLLQSVL VGLLILAVPV LRMIPTSVLW GYFTYMAVDS
501: LPGNQFWERL QLLFITPGRR FKVLEGLHAS FVEIVPYKSI VMFTLFQLLY FLICYGVTWI PVGGILFPLP FFILIALRQY ILQRLFDPSH LQVLDSSEYE
601: EMVGAPQRNS SFGFNGELRE AHNIPLSVVE NSEDEFYDAE ILDEITTSRG ELKHRTLSVK EDRSQMVKIY NHS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)